New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1617767 =	47 (0.830)	3 (0.060)	3/246	NT	7.2%	intergenic (‑22/+151)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC
	?	NC_002947	1617805 =	32 (0.590)					intergenic (‑60/+113)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC

ACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGC  >  NC_002947/1617660‑1617948                                                                                                                                                  |                                                                                                                                                 aCGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAAc                                                                                                                                               <  5:119795/149‑1 (MQ=255)     ccAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGc                                                                                                                                           <  4:295668/149‑1 (MQ=255)      tcaccaccactcctgtgggagcggccttgtgtcgggatcgggcgcgaagcggcccctggcacagccgatacgatgcttcgtacagatcgcatcggcaggtttAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTaaa                                                                                                                                                >  5:158787‑M1/103‑143 (MQ=255)      tcaccaccactcctgtgggagcggccttgtgtcgggatcgggcgcgaagcggcccctggcacagccgatacgatgcttcgtacagatcgcatcggcaggtttAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTaaa                                                                                                                                                <  6:158787‑M1/41‑1 (MQ=255)          caccactcctgtgggagcggccttgtgtcgggatcgggcgcgaagcggcccctggcacagccgatacgatgcttcgtacagatcgcatcggcaggtttAGCGGCCTTGCGGCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATg                                                                                                                                      >  3:70193‑M1/99‑149 (MQ=255)           cggcACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGc                                                                                                                                     <  4:131054/149‑1 (MQ=255)              cacacaTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGAt                                                                                                                                  <  2:244422/149‑1 (MQ=255)              cacacaTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGAt                                                                                                                                  >  2:301717/1‑149 (MQ=255)                 acaTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGcc                                                                                                                                          >  7:275444/1‑138 (MQ=255)                 acaTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGcc                                                                                                                                          <  8:275444/138‑1 (MQ=255)                  caTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGt                                                                                                                              <  7:53568/149‑1 (MQ=255)                                 gtaGGCGAAAATGGGGTGAAGGATGATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTGGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCTTCGTATc                                                                                                               <  8:331362/147‑1 (MQ=255)                                 cAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCg                                                                                                                                    >  6:167418/1‑128 (MQ=255)                                 cAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCg                                                                                                                                    <  5:167418/128‑1 (MQ=255)                                 cAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTCGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCCCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGAATc                                                                                                               >  7:331362/1‑149 (MQ=255)                                        aaaaTGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCtgtg                                                                                                        >  8:135079/1‑149 (MQ=255)                                               gTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAggg‑g                                                                                                >  4:63036/1‑149 (MQ=255)                                                   aaGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGc                                                                                            <  1:301717/149‑1 (MQ=255)                                                     ggATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCg                                                                                                                                         >  7:62501/1‑103 (MQ=255)                                                     ggATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCg                                                                                                                                         <  8:62501/103‑1 (MQ=255)                                                      gagcATTGGGGAATCCTCGTTGGGATTGCGCAAGTGACATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCGGCCGCTAAACCTGCCGATGCGATCTGTACGCAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTc                                                                                         <  5:68915/146‑1 (MQ=39)                                                        tCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTcgc                                                                                       <  6:368461/149‑1 (MQ=255)                                                           ttGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGcc                                                                                    >  3:345208/1‑149 (MQ=255)                                                                   tCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCg                                                                            <  3:63036/149‑1 (MQ=255)                                                                     cTCGTTGGGATTGCTCAAGTGTAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGa                                                                           <  4:336463/148‑1 (MQ=255)                                                                     cTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGa                                                                           <  7:135079/148‑1 (MQ=255)                                                                            ggATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAgg                                                                    <  4:345208/148‑1 (MQ=255)                                                                                  cTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGaa                                                                                                                         >  2:157882/1‑90 (MQ=255)                                                                                  cTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGaa                                                                                                                         <  1:157882/90‑1 (MQ=255)                                                                                        tGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATc                                                                               <  3:22082/125‑1 (MQ=255)                                                                                        tGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAAACTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATc                                                                               >  4:22082/1‑125 (MQ=255)                                                                                               catcggcaggtttagcggcagcttcgcgcccgatcgcgccgcaaggccgctAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAgtggtg                                                >  3:70193‑M2/52‑149 (MQ=255)                                                                                                aaaTCCTGTGGGAGCGGCCTGGCGTCGAGAGCGGGCGCTAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTCTCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCTATCCCGACACAAGGCCGCTCCCACAGGAgtggtgg                                               <  3:87560/149‑1 (MQ=39)                                                                                                         tttagcggcagcttcgcgcccgatcgcgacgcaaggccgctAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGa                                            <  6:158787‑M2/102‑1 (MQ=255)                                                                                                         tttagcggcagcttcgcgcccgatcgcgacgcaaggccgctAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGa                                            >  5:158787‑M2/42‑143 (MQ=255)                                                                                                                     gcggcgCGAGCGGGCGCGAAGCTGCCGCTAAACCTGCCGAGGCGATCTGTACGACGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACt                            <  3:47792/147‑1 (MQ=255)                                                                                                                           cgATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAgg                    >  4:84921/1‑149 (MQ=255)                                                                                                                                 ggCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCg                                                                 >  8:223360/1‑98 (MQ=255)                                                                                                                                 ggCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCg                                                                 <  7:223360/98‑1 (MQ=255)                                                                                                                                             ccgctAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAgc  >  4:104391‑M2/6‑149 (MQ=255)                                                                                                                                              cgctAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGGACCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGCTGGTGAGTCAGACAGGCTTACTGCATCAGGCCGAATTCCTTGGCCAgc  >  1:275323‑M2/5‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                 ACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGG‑GCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGC  >  NC_002947/1617660‑1617948

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.