New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3166894 = | 53 (0.940) | 4 (0.070) | 4/244 | NT | 7.9% | coding (31/1212 nt) | PP_2781 | beta‑ketoacyl synthase |
? | NC_002947 | 3166948 = | 43 (0.800) | coding (85/1212 nt) | PP_2781 | beta‑ketoacyl synthase |
TTCGGTTTCGGCGGCCTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCACGCCGGCAGTG > NC_002947/3166805‑3167094 | ttCGGTTTCGGCGGCCTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACAGCGGGGGTCGCGATTGCCGGTGCGGGTTGCGTTTTGCCCAGCGGGTGGGGTGTCGAGTATTTATGGGCGGCCGCAACCGAAg > 1:111581/1‑149 (MQ=255) ttCGGTTTCGGCGGCCTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAggg > 1:341977/1‑149 (MQ=255) gTTTCGGCGGCCTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGaa < 4:7188/149‑1 (MQ=255) cggcggCCTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCGAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTg < 6:124391/148‑1 (MQ=255) ccTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTAc > 2:178138/1‑149 (MQ=255) cTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGaa < 6:121916/138‑1 (MQ=255) cTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGaa > 5:121916/1‑138 (MQ=255) cTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCAGGGCGGCCGCAACCGAAGGGCGATGTGCAATGACg > 8:330989/1‑149 (MQ=255) aaCACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGgcg > 2:96340/1‑149 (MQ=255) ttCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGgcg < 7:267569/144‑1 (MQ=255) ttCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGgcg > 8:267569/1‑144 (MQ=255) ccgaacgccaccacgcgttcgctgctgaaccgtcgggcgttcagcgccgtaattgcacttcgcccttcGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGaa < 1:181219‑M1/57‑1 (MQ=255) ccgaacgccaccacgcgttcgctgctgaaccgtcgggcgttcagcgccgtaattgcacttcgcccttcGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGaa > 2:181219‑M1/69‑125 (MQ=255) aCTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGaa < 8:284746/127‑1 (MQ=255) aCTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGaa > 7:284746/1‑127 (MQ=255) gcTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACg < 4:8445/149‑1 (MQ=255) gCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGaa > 2:115280/1‑116 (MQ=255) gCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGaa < 1:115280/116‑1 (MQ=255) gCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTc < 1:178138/148‑1 (MQ=255) ggAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAAcg > 7:215476/1‑149 (MQ=255) aaaCA‑‑GGCGGGCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCg < 2:111581/148‑1 (MQ=255) aaCA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCggg > 2:288435/1‑149 (MQ=255) aaCA‑‑GGCGGTCGCGATTGCCGGTGAGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCggg > 6:144075/1‑149 (MQ=255) a‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTCGTGGCG‑TTCGGGCa > 4:136942/1‑148 (MQ=255) tCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCTACCGAAGGGCGAAGTGAAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATtcag < 2:341977/149‑1 (MQ=255) tCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATtcag < 1:103847/149‑1 (MQ=255) tCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATtcag < 7:330989/149‑1 (MQ=255) tCGCGATTGCCGGTGCGGGTTGCGTGTCGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATtcag < 1:267963/149‑1 (MQ=255) gcgATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATtcagga < 8:215476/149‑1 (MQ=255) gATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCgg > 5:319956/1‑135 (MQ=255) gATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCgg < 6:319956/135‑1 (MQ=255) ggTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGacca > 4:41462/1‑149 (MQ=255) gTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCGATTCGGGCAAATTCAGGATCAGGacca < 1:186763/149‑1 (MQ=255) ttcggttgcggccgcccagaaagactcgacaccccagccgctgggcaacacgcaaccGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCgg > 2:181219‑M2/58‑125 (MQ=255) ttcggttgcggccgcccagaaagactcgacaccccagccgctgggcaacacgcaaccGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCgg < 1:181219‑M2/68‑1 (MQ=255) GGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCATCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATtcaggatca < 4:253494‑M1/137‑1 (MQ=255) GGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATtcaggatca > 3:253494‑M1/1‑137 (MQ=255) gttgcggccgcccagaaagactcgacaccccagccgctgggcaacacgcaaccGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCagcagc > 3:67127‑M2/54‑101 (MQ=255) gttgcggccgcccagaaagactcgacaccccagccgctgggcaacacgcaaccGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCagcagc < 4:67127‑M2/48‑1 (MQ=255) GTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACg < 1:165360‑M1/148‑1 (MQ=255) ttGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGAc > 3:170275/1‑148 (MQ=255) gCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGAc > 5:141526/1‑146 (MQ=255) cccAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGa > 8:51078/1‑149 (MQ=255) cccAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGa > 2:194507/1‑149 (MQ=255) cGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCTATTACGTCGCTGAAGGCCCGACGGTTCAGCAGCGAACGCGTGGTGGGG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTg < 4:101092/149‑1 (MQ=255) ggCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTgc < 1:288435/149‑1 (MQ=255) tGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGGAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTgcgc > 4:63058/1‑148 (MQ=255) tGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTgcgc > 3:249873/1‑148 (MQ=255) tCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCtt < 1:177924/149‑1 (MQ=255) tCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGtt < 4:170275/147‑1 (MQ=255) tCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTa < 1:96340/148‑1 (MQ=255) tGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTg > 4:327622/1‑149 (MQ=255) ggcggcCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACt < 1:335533/146‑1 (MQ=255) gcggcCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCAc < 5:144075/149‑1 (MQ=255) cgcaaccGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCACGCCgg > 8:129590‑M2/8‑149 (MQ=255) gcaaccGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGAAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCACGCCgg > 4:306575‑M2/7‑148 (MQ=255) caaccGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCACGc > 2:135397‑M2/6‑144 (MQ=255) caaccGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCACGc < 1:135397‑M2/139‑1 (MQ=255) cGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCACGCCGGCAGTg < 2:134639‑M2/147‑1 (MQ=255) cGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCACGCCGGCAGTg > 1:134639‑M2/2‑148 (MQ=255) | TTCGGTTTCGGCGGCCTCAACACTTCACTGGCGCTTGGCAAGTACCGGGAGGCGCCGCGATGAAACA‑‑GGCGGTCGCGATTGCCGGTGCGGGTTGCGTGTTGCCCAGCGGCTGGGGTGTCGAGTCTTTCTGGGCGGCCGCAACCGAAGGGCGAAGTGCAATTACGGCGCTGAACGCCCGACGGTTCAGCAGCGAACGCGTGGTGGCG‑TTCGGGCAAATTCAGGATCAGGACCACCAACGCAGCCGACAAGACCTTGCGCAAAACCTTCAGCGTTACTGCACGCCGGCAGTG > NC_002947/3166805‑3167094 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |