New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4537518 =	NA (NA)	4 (0.070)	4/248	NT	100%	coding (853/1533 nt)	PP_4025	transposase
	?	NC_002947	4537544 =	0 (0.000)					coding (879/1533 nt)	PP_4025	transposase

TGAAACTCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAA  >  NC_002947/4537397‑4537690                                                                                                                                                    |                                                                                                                                                   ttcgacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGc                                                                                                                                                   >  8:231941‑M2/148‑149 (MQ=255)   cgacgactttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgctgcggcacctcctgcgcgcgGc                                                                                                                                                   <  8:232452‑M2/2‑1 (MQ=255)   cgacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatctcgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGCTg                                                                                                                                                 >  1:294820‑M2/146‑149 (MQ=255)   cgacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGCTg                                                                                                                                                 >  6:256987‑M2/146‑149 (MQ=255)   cgacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGCTg                                                                                                                                                 >  7:47861‑M2/146‑149 (MQ=255)    gacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGCTgg                                                                                                                                                >  5:18808‑M2/145‑149 (MQ=255)    gacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGCTgg                                                                                                                                                >  8:193361‑M2/145‑149 (MQ=255)    gacgaatttacgccggacatgcgccatgcacgccagtcgttcaacgcccggctgtagcgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGCTg                                                                                                                                                 <  5:256987‑M2/4‑1 (MQ=255)      cgaatttacgccggacatgcgccatgcacgccagtcgttcaacggccggctgtagctacaacgcattgtaaccggcgtaatcatcggtcatcacgtaacctcgatagccctcctgcaggcgcagcggcacctcctgcgcgcggcttgtg                                                                                                                                              <  2:318139‑M2/7‑5 (MQ=255)                                                             cgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGCt                                                                                                                                                  <  7:301483‑M2/3‑1 (MQ=255)                                                             cgccaacgcgttgtaaccggcgtaatcatcggtcatcacgtaaccgcgatagccctccagcaggcgcagcggcacctcctgcgcgcgGCt                                                                                                                                                  >  8:301483‑M2/88‑90 (MQ=255)                                                                                                                  cctccagcaggcgcagcggcacctcctgcgcgcgGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATtc                                  >  6:120279‑M2/35‑149 (MQ=255)                                                                                                                   ctccagcaggcgcagcggcacctcctgcgcgcgGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATtcg                                 >  5:177739‑M2/34‑149 (MQ=255)                                                                                                                    tccagcaggcgcagcggcacctcctgcgcgcgGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCAGGTTACAACGCGTTGGCGCGACAGCCGGGCGTTGAACGACTGACGTGCATGGTGCATGTCCGGCGTAAATtcgt                                >  8:258340‑M2/33‑149 (MQ=255)                                                                                                                               cagcggcacctcctgcgcgcgGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGa                     <  5:120279‑M2/128‑1 (MQ=255)                                                                                                                                                    GCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCaa  >  8:242618‑M2/1‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                                   TGAAACTCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAA  >  NC_002947/4537397‑4537690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.