New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4802485	45 (0.800)	5 (0.090)	5/242	NT	10.6%	coding (829/972 nt)	PP_4231	xanthine dehydrogenase accessory factor
	?	NC_002947	= 4802518	42 (0.790)					coding (796/972 nt)	PP_4231	xanthine dehydrogenase accessory factor

GCGCACGAAGGATATCGGCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTGGCGATGA  >  NC_002947/4802371‑4802655                                                                                                                                                    |                                                                                                                                          gcgcACGAAGGATATCGGCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAg                                                                                                                                          >  7:8041‑M2/1‑148 (MQ=255)    cACGAAGGATATCGGCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAggtg                                                                                                                                       >  7:88084‑M2/1‑145 (MQ=255)       gAAGGATATCGGCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGa                                                                                                                                           >  2:113731/1‑142 (MQ=255)       gAAGGATATCGGCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCAATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGa                                                                                                                                           <  1:113731/142‑1 (MQ=255)        aaGTATAGCGGCCTGTACCGCCTGGGCGATCTCGGCGGGGGTCTGGCTGCCCCGGTTCCGCCCTATCGGCGCATGGATGCCTGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAggtggcct                                                                                                                                   >  1:108080‑M2/1‑141 (MQ=255)            atatCGGCCAGGACCGCCACGGCGATCTCGGCCGGGGTCTTGCGGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGa                                                                                                                               <  8:287797/149‑1 (MQ=255)              atCGGCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGc                                                                                                                             >  7:200466/1‑149 (MQ=255)                  gCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCtt                                                                                                                                  >  4:328338/1‑140 (MQ=255)                  gCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCtt                                                                                                                                  <  3:328338/140‑1 (MQ=255)                       tACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGc                                                                                                                    >  8:35076/1‑149 (MQ=255)                       tACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGc                                                                                                                    >  6:37529/1‑149 (MQ=255)                         ccGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGcc                                                                                                                   >  1:101704/1‑148 (MQ=255)                                ggCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGa                                                                                                           <  6:139131/149‑1 (MQ=255)                                     tctcGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCt                                                                                                      >  1:16090/1‑149 (MQ=255)                                        cGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCg                                                                                                   >  1:238467/1‑149 (MQ=255)                                         ggCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGc                                                                                                       <  2:101704/144‑1 (MQ=255)                                            cGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCt                                                                                                      >  2:327357/1‑142 (MQ=255)                                            cGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCt                                                                                                      <  1:327357/142‑1 (MQ=255)                                            cGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTc                                                                                               <  4:120524/149‑1 (MQ=255)                                            cGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTc                                                                                               <  2:172688/149‑1 (MQ=255)                                            cGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTc                                                                                               <  7:35076/149‑1 (MQ=255)                                                         cccAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAg                                                                                  >  2:323772/1‑149 (MQ=255)                                                                 cAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGcc                                                                           <  8:200466/148‑1 (MQ=255)                                                                      cTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCa                                                                     >  3:116742/1‑149 (MQ=255)                                                                                      gcgcgcCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCAt                                                     >  5:259329/1‑149 (MQ=255)                                                                                        gcgcCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCGAGCATGGCCAGGTCATCGATTTTTGGATCATgg                                                   <  2:238467/149‑1 (MQ=255)                                                                                         cgcCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATggg                                                  >  4:74758/1‑149 (MQ=255)                                                                                               cTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATg                                            <  5:37529/149‑1 (MQ=255)                                                                                                      cAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCcaccac                                     >  7:307608/1‑149 (MQ=255)                                                                                                       aaCCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAggtggcctgggttgcgacgagctggcgcgcatccatgcgccgataggcctgaacctgggcagcaagaccccggccgagatcgccctggcggta                                              <  2:74237‑M2/139‑94 (MQ=255)                                                                                                       aaCCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAggtggcctgggttgcgacgagctggcgcgcatccatgcgccgataggccctgaacctgggcagcaagaccccggccgagatcgccctggcggta                                             >  1:74237‑M2/1‑46 (MQ=255)                                                                                                       aaCCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTg                                                           <  1:251309/126‑1 (MQ=255)                                                                                                       aaCCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTg                                                           >  2:251309/1‑126 (MQ=255)                                                                                                       aaCCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACt                                    >  3:170775/1‑149 (MQ=255)                                                                                                          ccAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAggtggcctgggttgcgacgagctggcgcgcatccatgcgccgataggcctgaacctgggcagcaagaccccggccgagatcgccctggcggtactggccgatatcc                                 <  5:309239‑M2/149‑107 (MQ=255)                                                                                                          ccAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGcc                                 >  5:183760/1‑149 (MQ=255)                                                                                                          acAGGCCACCAATTCGCTGCAAGGGTTCGGGTCGCTTGGCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGcc                                 <  4:225781/148‑1 (MQ=255)                                                                                                           cAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCg                                >  5:296067/1‑149 (MQ=255)                                                                                                            aGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAggtggcctgggttgcgacgagctggcgcgcatccatgcgccgataggcctgaacctgggcagcaagaccccggccgagatcgccctggcggtactggccgatatcctt                               <  3:6491‑M2/149‑109 (MQ=255)                                                                                                            aGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCg                                >  5:105699/1‑148 (MQ=255)                                                                                                             ggCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAggtggcctgggttgcgacgagctggcgcgcatccatgcgccgataggcctgaacctgggcagcaagaccccggccgagatcgccctggcggtactggccgatatccttc                              >  4:6491‑M2/1‑40 (MQ=255)                                                                                                              gCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTAt                             >  2:178673/1‑149 (MQ=255)                                                                                                              gCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTAt                             <  6:105699/149‑1 (MQ=255)                                                                                                                caccaATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCGTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGTCAGGGCATCGATGGTTGGAGCAGGGGTCAATGCCCCCACTGCCGTATCg                           >  2:362215/1‑149 (MQ=255)                                                                                                                     aTTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATg                                                    >  4:218364/1‑119 (MQ=255)                                                                                                                         gCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTAAATGCCACCACTGCCGTAACGCCATgcaaa                  >  7:52460/1‑145 (MQ=255)                                                                                                                              aaGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCg                           <  7:332159/135‑1 (MQ=255)                                                                                                                              aaGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCg                           >  8:332159/1‑135 (MQ=255)                                                                                                                                   ttCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTgg        <  6:296067/149‑1 (MQ=255)                                                                                                                                   ttCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTgg        <  4:116742/149‑1 (MQ=255)                                                                                                                                   ttCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTgg        <  3:74758/149‑1 (MQ=255)                                                                                                                                      gcgACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGTCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTGGCGa     <  1:362215/149‑1 (MQ=255)                                                                                                                                       cgACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTGGCGAt    >  4:194102/1‑149 (MQ=255)                                                                                                                                       cgACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTGGCGAt    <  8:307608/149‑1 (MQ=255)                                                                                                                                         aCGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTGGCGATGa  <  6:259329/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                          GCGCACGAAGGATATCGGCCAGTACCGCCAGGGCGATCTCGGCCGGGGTCTTGCTGCCCAGGTTCAGGCCTATCGGCGCATGGATGCGCGCCAGCTCGTCGCAACCCAGGCCACCAATTCGCTGCAAGCGTTCGCGACGCTTGTCGGAGGTGGCCTTGGAGCCCATCACGCCGATGTAGAACGCTTCGGTTCGCACGGCTTCAAGCATGGCCAGGTCATCGATTTTTGGATCATGGGTCAATGCCACCACTGCCGTATCGGCATGGCAACCGCCATTGGCGATGA  >  NC_002947/4802371‑4802655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.