New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5989689 =3580 (63.320)10 (0.180) 7/250 NT 0.30% intergenic (+1/+348) PP_5247/ycaC‑III hypothetical protein/putative hydrolase
?NC_002947 5989745 = 3212 (58.630)intergenic (+57/+292) PP_5247/ycaC‑III hypothetical protein/putative hydrolase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 3867 total aligned reads displayed.

GCCTGTTCTGGAGCAACCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTAC  >  NC_002947/5989597‑5989893
                                                                                                                                                    |                                                                                                                                                    
gCCTGTTCTGGAGCAACCTGAACGCACTCGAAATGGCAGAACGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGAGAACCCGCTCCCACAGAGTCCTCGTCGaca                                                                                                                                                      >  7:265888/1‑149 (MQ=255)
    gTTCTGGAGCAACCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACggg                                                                                                                                                  >  4:325834/1‑149 (MQ=255)
    gTTCTGGAGCAACCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACggg                                                                                                                                                  >  8:273434/1‑149 (MQ=255)
        tGGAGCAACCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGgtgt                                                                                                                                               >  7:237913/1‑148 (MQ=255)
        tGGAGCAACCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTc                                                                                                                                              <  3:264012/149‑1 (MQ=255)
          gAGCAACCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGgtgt                                                                                                                                               <  1:272192/146‑1 (MQ=255)
            gCAACCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTa                                                                                                                                          >  2:295968/1‑149 (MQ=255)
              aaCCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTac                                                                                                                                         >  5:3543/1‑148 (MQ=255)
                ccTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTaccaa                                                                                                                                      <  1:47327/149‑1 (MQ=255)
                 cTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTaccaac                                                                                                                                     >  3:173058/1‑149 (MQ=255)
                   gAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTaccaacca                                                                                                                                   >  1:78111/1‑149 (MQ=255)
                   gAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTaccaacca                                                                                                                                   >  2:202804/1‑149 (MQ=255)
                     aCGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTaccaa                                                                                                                                      >  6:186172/1‑144 (MQ=255)
                         aCTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGaa                                                                                                                              >  1:16930/1‑148 (MQ=255)
                             gAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAggg                                                                                                                         <  4:154553/149‑1 (MQ=255)
                               aaTGGCCTAAGGGTTGGTTGAGGCATTGCTTGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGACTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGc                                                                                                                        <  1:345887/148‑1 (MQ=255)
                                  ggCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGcc                                                                                                                       <  3:292514/146‑1 (MQ=255)
                                  ggCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACt                                                                                                                    >  2:174401/1‑149 (MQ=255)
                                     aGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGtt                                                                                                                 >  8:244805/1‑149 (MQ=255)
                                       aaGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTc                                                                                                               >  5:135027/1‑149 (MQ=255)
                                        aGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTc                                                                                                               <  8:216642/148‑1 (MQ=255)
                                           gttggttgAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGt                                                                                                           >  4:284160/1‑149 (MQ=255)
                                           gttggttgAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCAACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGt                                                                                                           <  3:123257/149‑1 (MQ=255)
                                               gttgAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGaaa                                                                                                                             >  8:112786/1‑127 (MQ=255)
                                                ttgAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGc                                                                                                        >  2:41777/1‑147 (MQ=255)
                                                  gAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTa                                                                                                                                          <  4:102833/111‑1 (MQ=255)
                                                  gAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCa                                                                                                     >  7:56700/1‑148 (MQ=255)
                                                    cgCAATGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGTCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCa                                                                                                  <  6:107243/148‑1 (MQ=255)
                                                     gCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTaccaac                                                                                                                                     <  4:181230/113‑1 (MQ=255)
                                                     gCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAg                                                                                                 <  3:312124/149‑1 (MQ=255)
                                                       aTTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACgg                                                                                                                                                   >  3:238104/1‑97 (MQ=255)
                                                           cTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTc                                                                                           <  8:162062/149‑1 (MQ=255)
                                                            tGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTc                                                                                           >  5:109742/1‑148 (MQ=255)
                                                              gATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGa                                                                                         >  1:301464/1‑148 (MQ=255)
                                                               aTGTGATTGATTCAAAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGAGGTTTAACCCGCTCCCACAGAGTCCTCGTCTACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGat                                                                                        <  7:11521/148‑1 (MQ=255)
                                                                  ggATTGAGTCACACCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACTCGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTc                                                                                    <  5:281345/149‑1 (MQ=255)
                                                                   gATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTac                                                                                                                                         <  5:46030/95‑1 (MQ=255)
                                                                   gATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGc                                                                                                        >  8:192173/1‑128 (MQ=255)
                                                                    aTTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCa                                                                                   >  5:313420/1‑148 (MQ=255)
                                                                       gAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCatat                                                                                <  8:137877/148‑1 (MQ=255)
                                                                        aGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATg                                                                               <  3:346396/148‑1 (MQ=255)
                                                                         gTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAg                                                                                                 <  2:224164/129‑1 (MQ=255)
                                                                          tCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGca                                                                             >  2:9856/1‑148 (MQ=255)
                                                                            acaGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGcaca                                                                           <  3:52809/148‑1 (MQ=255)
                                                                            acaGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGcaca                                                                           <  4:87839/148‑1 (MQ=255)
                                                                             caGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACAcc                                                                         >  2:250911/1‑149 (MQ=255)
                                                                              aGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATg                                                                               >  8:71151/1‑142 (MQ=255)
                                                                               gCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACt                                                                                                                    <  3:190473/104‑1 (MQ=255)
                                                                                cccATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTc                                                                       >  6:38879/1‑148 (MQ=255)
                                                                                cccATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTc                                                                       >  7:79679/1‑148 (MQ=255)
                                                                                  cATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAg                                                                    >  7:211788/1‑149 (MQ=255)
                                                                                   aTGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATc                                                                                                   <  6:260861/117‑1 (MQ=255)
                                                                                   aTGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTAATATGCACACCTCAAGc                                                                   >  6:201557/1‑149 (MQ=255)
                                                                                     gAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCg                                                                 >  1:147483/1‑149 (MQ=255)
                                                                                       aCTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAg                                                                                                            <  4:206214/104‑1 (MQ=255)
                                                                                       aCTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCggg                                                               >  2:151505/1‑149 (MQ=255)
                                                                                       aCTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCggg                                                               <  7:144402/149‑1 (MQ=255)
                                                                                       aCTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCggg                                                               <  4:305692/149‑1 (MQ=255)
                                                                                       aCTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCgg                                                                <  4:127763/148‑1 (MQ=255)
                                                                                        cTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGCACCCGCTCCCACAGAGTCCTCGTCGACACTGGTGTCAGTACCAACCACAGAAACTGCCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCgggg                                                              <  6:162591/149‑1 (MQ=255)
                                                                                          gAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGgtg                                                            >  5:183044/1‑149 (MQ=255)
                                                                                           aGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAg                                                                                                            <  6:84799/100‑1 (MQ=255)
                                                                                             TCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGtgtg                                                          <  8:39594‑M1/148‑1 (MQ=255)
                                                                                                ccTGTATCGGCCTCTTCGCGGGTGAACCGGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAgg                                                      >  1:203214/1‑149 (MQ=255)
                                                                                                    tATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGtctc                                                  <  2:102433/149‑1 (MQ=255)
                                                                                                     aTCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCa                                                 >  3:150671/1‑149 (MQ=255)
                                                                                                        ggCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGc                                                                                                        >  7:293233/1‑91 (MQ=255)
                                                                                                         gCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCAccc                                              >  5:233563/1‑148 (MQ=255)
                                                                                                          ccTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGat                                                                                        <  5:201199/105‑1 (MQ=255)
                                                                                                           ctctTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCatat                                                                                <  3:79757/112‑1 (MQ=255)
                                                                                                            tctTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAg                                                                                                                           <  2:336966/68‑1 (MQ=255)
                                                                                                            tctTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCat                                                                                  >  8:318837/1‑109 (MQ=255)
                                                                                                            tctTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTaca                                          >  7:19573/1‑149 (MQ=255)
                                                                                                              ttCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTaccaac                                                                                                                                     <  1:325857/56‑1 (MQ=255)
                                                                                                              ttCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGca                                                                             <  2:270698/112‑1 (MQ=255)
                                                                                                              ttCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTaca                                          <  5:71753/147‑1 (MQ=255)
                                                                                                                   gggTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAATACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACtgatga                                   >  1:251308/1‑149 (MQ=255)
                                                                                                                     gTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCggg                                                               >  4:229903/1‑119 (MQ=255)
                                                                                                                     gTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTgatgat                                  >  6:235476/1‑148 (MQ=255)
                                                                                                                           ccGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCggg                                                               >  8:300502/1‑113 (MQ=255)
                                                                                                                           ccGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAg                                                       <  5:161437/121‑1 (MQ=255)
                                                                                                                                 ccACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATg                     >  4:3938/1‑149 (MQ=255)
                                                                                                                                  cacaGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATgg                    >  6:59958/1‑149 (MQ=255)
                                                                                                                                  cacaGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATgg                    <  6:338793/149‑1 (MQ=255)
                                                                                                                                  cacaGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATgg                    <  2:125017/149‑1 (MQ=255)
                                                                                                                                   acaGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAg                                                       >  7:334099/1‑113 (MQ=255)
                                                                                                                                   acaGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCt                                             >  5:255209/1‑123 (MQ=255)
                                                                                                                                   acaGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATggg                   >  6:313470/1‑149 (MQ=255)
                                                                                                                                    caGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCacac                                                                          <  6:131906/93‑1 (MQ=255)
                                                                                                                                        gTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTcc              <  3:217256/149‑1 (MQ=255)
                                                                                                                                           cTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATg                     >  1:100752/1‑139 (MQ=255)
                                                                                                                                           cTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGa           <  1:228726/149‑1 (MQ=255)
                                                                                                                                            tcgtcgACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCg                                                                                          >  6:286837/1‑69 (MQ=255)
                                                                                                                                            tcgtcgACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAg                                                       <  2:70298/104‑1 (MQ=255)
                                                                                                                                            tcgtcgACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGAt          >  4:255678/1‑149 (MQ=255)
                                                                                                                                              gtcgACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGATc         >  7:171836/1‑148 (MQ=255)
                                                                                                                                               tcgACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGcc                                                                  <  2:316436/90‑1 (MQ=255)
                                                                                                                                                cgacACGGGTGTCAGTACCAACCACATAAAAGGGCCACTGTTTCCTGTGGCCCATCAGATGCTCGATATTCATATGCACACTTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGATCCa       <  7:310560‑M2/144‑1 (MQ=255)
                                                                                                                                                   cACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCa                               >  1:125308‑M2/2‑121 (MQ=255)
                                                                                                                                                    acGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCCCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTAc  <  4:58458/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCCTGTTCTGGAGCAACCTGAACGCACTCGAAATGGCAGAAGGGTTGGTTGAGGCATTGCTGGATGGGATTGAGTCACAGCCCATGAACTGAGTCGCCTGTATCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGAGTCCTCGTCGACACGGGTGTCAGTACCAACCACAGAAAAGGGCCACTGTTTCCAGTGGCCCATCAGATGCTCGATATTCATATGCACACCTCAAGCCGGGGTGTGGAGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTAC  >  NC_002947/5989597‑5989893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.