| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,960,967 | G→C | 7.2% | intergenic (‑149/+115) | fliE ← / ← atoC | flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,960,967 | 0 | G | C | 7.2% | 175.0 / 2.0 | 62 | intergenic (‑149/+115) | fliE/atoC | flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC |
| Reads supporting (aligned to +/- strand): ref base G (24/33); new base C (3/2); total (27/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01 | |||||||||||
CCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGAC > NC_002947/4960821‑4961105 | cccTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGAATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCaga < 1:265845/149‑1 (MQ=255)cccTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGTCGCagag > 8:82281/1‑149 (MQ=255)cccTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCagag > 5:262335/1‑149 (MQ=255) ccTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGc > 3:13207/1‑149 (MQ=255) tctcCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCg > 8:229031/1‑149 (MQ=255) tctcCGGCGGCCCCATCTTTAGGACAGTCATGCGGCGAATGACCTACCTAAACCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGccc < 6:252714/147‑1 (MQ=39) tcCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGACCGGCCCCGGc > 5:77377/1‑149 (MQ=255) cTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCNTCGCGATAGGGCCGCAGAGCGGCCCCGGCg < 1:33813/148‑1 (MQ=255) cTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTCTGCGGccctatc < 3:150722/147‑5 (MQ=255) ggCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCtt < 6:175994/149‑1 (MQ=255) ccGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTTGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTg < 1:53463/149‑1 (MQ=255) ccGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTg < 7:229031/149‑1 (MQ=255) aTTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTCTGCGGcccta > 8:167586/1‑133 (MQ=255) aTTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTCTGCGGcccta < 7:167586/135‑3 (MQ=255) tttttttGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgcggcg < 1:79529/149‑1 (MQ=255) tttttttGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgcggcg > 7:80075/1‑149 (MQ=255) tttttttGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgcggcg > 1:243439/1‑149 (MQ=255) tttttttGACAGTCATGCGGCGAATGACCTACCAAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgcggcg < 2:45918/149‑1 (MQ=255) ttttGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGCTCTTTGCGGCGGAg > 6:73183/1‑149 (MQ=255) gACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTg < 5:86077/148‑1 (MQ=255) gTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGAc > 4:313583/1‑149 (MQ=255) tGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTgg < 3:250254/149‑1 (MQ=255) cggcgAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGGCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTggg < 7:82281/148‑1 (MQ=255) gAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGc < 5:122857/149‑1 (MQ=255) acctacctAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTcgc < 3:262032/149‑1 (MQ=255) acctacctAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTcg < 3:313583/148‑1 (MQ=255) acctacctAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGAACTTTGCGGCGGTGGTGAAGACATGGGGCAGCTAcgc > 4:262032/1‑149 (MQ=38) cctacctaAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTcgcg > 7:91255/1‑149 (MQ=255) cctacctaAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTcgcg > 6:303058/1‑149 (MQ=255) ctacctaAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCgcgc > 5:369974/1‑149 (MQ=255) taAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCAt > 1:189816/1‑149 (MQ=255) aaaGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGCCCGGGGGCCGCGTAGCGCCCCAtt > 2:9599/1‑149 (MQ=255) aaaGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCGTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCAt > 7:302636/1‑148 (MQ=255) caacaaAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGAGGTTTGCGGGGGCGCTGGAGACCTGGGGCCGCTTGGCGgccccgtggcg > 8:303970/1‑142 (MQ=38) acaaAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGa > 4:303758/1‑148 (MQ=255) acaaAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCATGCGTCGCGATAGGGCCGCACAGCGGCCCCGGCGAGCATTGCGGCGGAGCTGAAGACCTGGGGCCCCTTAGCGACCCATTcgacac > 4:220312/1‑145 (MQ=38) aaaGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGGGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGacac < 8:91255/149‑1 (MQ=255) gCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGcc < 5:258016/149‑1 (MQ=255) ccTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTcc < 3:220312/149‑1 (MQ=255) ttCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCca > 8:246415/1‑149 (MQ=255) gCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACag < 2:189816/149‑1 (MQ=255) cAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACaga < 7:267961/149‑1 (MQ=255) tttCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCcgc < 5:73183/149‑1 (MQ=255) cAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAg < 7:246415/149‑1 (MQ=255) agag‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCag < 6:37388/110‑2 (MQ=255) agag‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCag > 5:37388/1‑109 (MQ=255) aTCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCa < 8:260383/149‑1 (MQ=255) cacacaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACaga < 1:157793/130‑1 (MQ=255) cacaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACaga > 7:230258/1‑128 (MQ=255) cacaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACaga < 8:230258/128‑1 (MQ=255) aTTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAttt < 3:303758/149‑1 (MQ=255) aTTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAttt < 2:243439/149‑1 (MQ=255) ccTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGc < 5:303058/148‑1 (MQ=255) cGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCCCGCCAGTTGCAGATGATTTGCCAGTc < 1:9599/149‑1 (MQ=255) gAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGc > 7:35330/1‑149 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGaa > 5:342672/1‑147 (MQ=255) ttGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAttt < 7:328749/131‑1 (MQ=255) ttGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAttt > 8:328749/1‑131 (MQ=255) ttGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGt > 1:164445/1‑137 (MQ=255) cGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCt < 8:35330/148‑1 (MQ=255) cGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTg < 6:369974/149‑1 (MQ=255) tCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCgcgc < 8:137548/110‑1 (MQ=255) tCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCgcgc > 7:137548/1‑110 (MQ=255) cgATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTc < 6:342672/149‑1 (MQ=255) cggggCCGCTCTGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCGGGCCTCGAc > 8:326612/3‑149 (MQ=255) | CCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAG‑ATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGAC > NC_002947/4960821‑4961105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |