| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 390,088 | G→T | 7.2% | S121I (AGC→ATC) | soxA → | sarcosine oxidase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 390,088 | 0 | G | T | 7.2% | 243.3 / 4.4 | 77 | S121I (AGC→ATC) | soxA | sarcosine oxidase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base G (35/36); new base T (3/3); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
ATCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACAT > NC_002947/389946‑390226 | aTCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACGAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCATCatgct > 1:115346/1‑147 (MQ=255) tCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCatgatcgggcg > 1:308324/1‑143 (MQ=255) tCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATgccgcc > 8:191693/1‑149 (MQ=255) cAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAATAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGccgccg < 8:296723/148‑1 (MQ=255) cAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCATCATGCTgccgccaa < 6:105597/149‑3 (MQ=255) cAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCATCATGCTgccgcc < 2:115346/147‑1 (MQ=255) aGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCggg > 4:5237/1‑149 (MQ=255) aGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCggg > 3:116365/1‑149 (MQ=255) gCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGc < 4:116365/149‑1 (MQ=255) aGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCACCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCAGGATGCCGCCGGGCTTct < 1:281167/149‑1 (MQ=255) gCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAGCGACGTCAGGGGCATCGTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTcta > 4:298942/1‑149 (MQ=255) aCCCAGATACCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCAACCAGCCCCAACGGTTGGCCGAACGTCAACACCGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCCCCGGGCGTgtacta > 2:161121/1‑149 (MQ=255) cccAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctacta > 4:326708/1‑148 (MQ=255) ccAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCtacta‑c > 7:57122/1‑148 (MQ=255) tCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAAcc > 7:26880/1‑149 (MQ=255) cccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCtt > 5:185843/1‑149 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTTCTA‑CAAAACCtt > 1:207810/1‑148 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCtt > 3:280538/1‑148 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTc < 4:280538/149‑1 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTc < 3:5237/149‑1 (MQ=255) cAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑Caaa > 6:290630/1‑142 (MQ=255) cAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑Caaa < 5:290630/142‑1 (MQ=255) aaCGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCAt < 8:39407/149‑1 (MQ=255) gcgcgcCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGTTTCTACTA‑CAAAACCTTc < 8:57408/142‑1 (MQ=255) gcgcgcCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGTTTCTACTA‑CAAAACCTTc > 7:57408/1‑142 (MQ=255) ccACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCaaa < 4:31783/149‑1 (MQ=255) cACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAAt > 8:179015/1‑149 (MQ=255) aCCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTTCTA‑CAAAACCTTCATGTACCCCAAATc < 2:207810/149‑1 (MQ=255) aCCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATc > 5:130177/1‑149 (MQ=255) cAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGtt > 2:221806/1‑149 (MQ=255) aaCAGTCACTGTACGCGGGCCTTGTCGCCACCAGCACCATCTGTGGGCCGAACGTCAACAACGACGTGATGGGCATCCTCGGCAAGGTTGGCGTCATCATGATGCCGCCGTGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTc < 4:317554/149‑1 (MQ=255) aGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTgg < 7:287113/149‑1 (MQ=255) ggCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGa > 2:352170/1‑149 (MQ=255) gCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGAt < 7:191693/149‑1 (MQ=255) cACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGAt > 5:360906/1‑148 (MQ=255) cgcgGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTAc < 8:26880/148‑1 (MQ=255) cgcgGGCCGTGTCGCCACCATCACCAAAGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGGTGGCGGCCGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTAc < 6:352156/148‑1 (MQ=255) gggCCTTGTCGCCACCAGCACCATCGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCAGGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACgaga < 3:298942/149‑1 (MQ=255) gggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTc > 4:283455/1‑115 (MQ=255) gggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTc < 3:283455/115‑1 (MQ=255) ggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGaa < 6:130177/149‑1 (MQ=255) ccTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGt < 4:307380/149‑1 (MQ=255) ccaccaGCACCAACGGTTGGCCGAACGTCATCAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCg > 1:30840/1‑148 (MQ=255) ccaccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCg > 2:164119/1‑148 (MQ=255) ccaccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCg > 3:147923/1‑148 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGt > 7:220197/1‑148 (MQ=255) ccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTaaa < 3:326190/149‑1 (MQ=255) ccAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgcc > 8:40533/1‑149 (MQ=255) cAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGccgccg < 8:57122/149‑1 (MQ=255) cAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGccgccg < 1:164119/149‑1 (MQ=255) ggCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTggg < 1:221806/148‑1 (MQ=255) ggCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGAGGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTggg < 1:161121/148‑1 (MQ=255) ccGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAACGCCGCCGGCCTGGGCCg > 2:52511/1‑149 (MQ=255) cGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGt < 4:164480/149‑1 (MQ=255) gAACGTCAATAACGAAGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTg < 6:157493/149‑1 (MQ=255) gAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAATCCTTCATGTACCCCAAATAGTTCTGGAAGACTTACGAGAAGTACATCCGTAAAGCAGCCGGCCTGCGCCGTg > 8:200278/1‑149 (MQ=255) gTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAACCCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGcgcc > 8:265656/1‑149 (MQ=255) gTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGcgcc > 6:144764/1‑149 (MQ=255) tCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGcgccg < 7:179015/149‑1 (MQ=255) aacaacGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAg < 3:101534/111‑1 (MQ=255) aacaacGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAg > 4:101534/1‑111 (MQ=255) aacGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTc > 3:245195/1‑90 (MQ=255) aacGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTc < 4:245195/90‑1 (MQ=255) aacGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCa < 6:360906/149‑1 (MQ=255) gTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGa > 3:56373/1‑149 (MQ=255) gTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGa < 4:244234/149‑1 (MQ=255) aTGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATc < 2:308324/148‑1 (MQ=255) gCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGt > 4:215683/1‑125 (MQ=255) gCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGt < 3:215683/125‑1 (MQ=255) gCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgcgc > 8:258026/1‑129 (MQ=255) gCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgcgc < 7:258026/129‑1 (MQ=255) ggCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTAc < 8:48739/147‑1 (MQ=255) ggCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGa < 7:302356/149‑1 (MQ=255) ggCAAGGTTGCCGGCAGCATGATGCCGGCGGGCTTCTACTA‑CAAAACGTTCATGTACCCCATATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGa < 4:310456/149‑1 (MQ=255) aaGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTa > 5:118015/1‑149 (MQ=255) ccggcggcATCATGCTGCCGACGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACAt > 6:246848/3‑148 (MQ=255) cggcggcATCATGCTGCCGCCGGGCTTCTACTATCAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACAt > 1:43109/2‑148 (MQ=255) | ATCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTA‑CAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACAT > NC_002947/389946‑390226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |