| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,253,883 | G→A | 7.1% | R251C (CGC→TGC) | PP_4630 ← | MerR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,253,883 | 0 | G | A | 7.1% | 206.9 / 3.0 | 70 | R251C (CGC→TGC) | PP_4630 | MerR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (29/36); new base A (3/2); total (32/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
GACGGGCCAGAAACTGCCGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTTCGTCGCTGCCCAG > NC_002947/5253736‑5254030 | gACGGGCCAGAAACTGCCGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGgcgc > 5:272729/1‑149 (MQ=255) aCGGGCCAGAAACTGCCGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCt > 2:264763/1‑149 (MQ=255) gCCAGAAACTGCCGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGaa < 1:341388/149‑1 (MQ=255) cAGAAACTGCCGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGt > 6:106474/1‑149 (MQ=255) aCTGCCGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTg > 2:131771/1‑149 (MQ=255) ccGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGc > 7:339251/1‑147 (MQ=255) ccGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGa < 2:27614/149‑1 (MQ=255) cGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAg < 1:360170/149‑1 (MQ=255) aaGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCCGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑c > 7:125312/1‑149 (MQ=255) gcgcTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑ctg < 8:20880/149‑1 (MQ=255) gcgcTGGCGCAGCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCGGGCGAGTT‑ctg < 6:21198/149‑1 (MQ=255) gcTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑ctgct < 6:354009/149‑1 (MQ=255) cTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑ctgct < 1:332650/148‑1 (MQ=255) cTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑ctgct > 2:332650/1‑148 (MQ=255) gcgcATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCtgtg < 5:24096/148‑1 (MQ=255) gcATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCATTAACAACGTGCATTCGAGCATCGACGCCAGGCGCTTGAAGTTCCTGGCGAGTT‑CTGCTGTGGGc < 2:117290/149‑1 (MQ=255) acacTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGAGCGACt > 4:127520/1‑148 (MQ=255) cacTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGa < 5:106474/149‑1 (MQ=255) acTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGAt > 8:65289/1‑149 (MQ=255) acTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGAGCGACTGAt < 3:127520/149‑1 (MQ=255) cTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATg < 3:47506/149‑1 (MQ=255) gcCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCa < 1:131771/149‑1 (MQ=255) ccAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAGCGGGCATTCCAGCATCGACGCCAGGCGCTCGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCAc > 3:49513/1‑148 (MQ=255) aggcTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCg > 2:279366/1‑149 (MQ=255) cAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCgg < 8:125312/148‑1 (MQ=255) cAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCgg < 8:339251/148‑1 (MQ=255) gggCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTGACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCtt > 5:306124/1‑149 (MQ=255) ggCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTc < 1:318114/149‑1 (MQ=255) ggCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTc > 1:220995/1‑149 (MQ=255) tGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCACTTCAAgc < 3:83055/87‑2 (MQ=255) tGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCACTTCAAgc > 4:83055/1‑86 (MQ=255) cagccagGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGt > 2:3513/1‑149 (MQ=255) agccagGCTGTCCTGTACCGCTTCCGCTGCTTCAAAAGCCAGTAACAACGGGCATTCCAGCATCGACGCCCGGCGCTTGAAGTGGCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGTAAACAGCACCAGGGCGTCCGGCTTCAGCCGtt > 7:188192/1‑149 (MQ=255) cagGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTTCCTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCg < 1:279366/149‑1 (MQ=255) cTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTGACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGAc < 6:306124/149‑1 (MQ=255) ccTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAgc < 4:261314/149‑1 (MQ=255) cTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAGCGGGCATTCCAGCATCGACGCCAGGCGCTCGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAgc < 4:49513/148‑1 (MQ=255) gTACAGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAgcgc > 4:90650/1‑148 (MQ=255) tACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCa < 6:308472/138‑1 (MQ=255) tACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACACCACCAGGGCGTCCGGCTTCAGCCGTTCGCa > 5:308472/1‑138 (MQ=255) cGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCt > 8:304112/1‑149 (MQ=255) gctgctTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTggg < 8:35383/80‑1 (MQ=255) gctgctTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTggg > 7:35383/1‑80 (MQ=255) ctTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCg < 7:65289/147‑1 (MQ=255) tCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTg > 2:208759/1‑149 (MQ=255) cACCAGCCAGTAACAACGGGCATTCCAGCATCGCCGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCgg > 6:167871/1‑145 (MQ=255) cACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCgg < 5:167871/145‑1 (MQ=255) cACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCt < 1:79330/147‑1 (MQ=255) ccagccagTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGccc > 1:150000/1‑149 (MQ=255) cagccagTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCg > 4:228690/1‑149 (MQ=255) agccagTAACAACGGGCATGCCAGCATCGACGCCAGGCGCTTGTAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGt < 6:272729/149‑1 (MQ=255) gccagTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGtt < 2:150000/149‑1 (MQ=255) tAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCa < 2:220995/149‑1 (MQ=255) acGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCggg < 1:208759/149‑1 (MQ=255) gggCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACTGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGAt > 2:356392/1‑149 (MQ=255) gggCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCaa < 1:144292/115‑1 (MQ=255) gggCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCaa > 2:144292/1‑115 (MQ=255) ggCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATc < 3:228690/149‑1 (MQ=255) ttCGAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGTCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCAcgc < 5:335651/149‑1 (MQ=255) ttCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCAcgc < 7:304112/149‑1 (MQ=255) tCCAGCATCGACGCCAGGCGCTTGAAGTGCGTGGGGAGTT‑GTGCTGTGGGCGACAGATGGCAAAACACCACCAGGGCGTCCGGCTTCAGCCGTTAGCACACCAGCGCCAGCAGCAGCA‑GCGGCAGCCCGTTAGCCAGCGGGCTcccccg > 2:342347/1‑144 (MQ=255) tCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCAcgcg > 2:336983/1‑149 (MQ=255) cAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCgtg > 4:240341/1‑149 (MQ=255) cAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCgt < 1:3513/148‑1 (MQ=255) gACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTtcgtc < 1:336983/149‑1 (MQ=255) gACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTtcgtc < 1:342347/149‑1 (MQ=255) tcGCCAGGCACTTCAAGCGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCgg > 6:56079/2‑130 (MQ=255) tcGCCAGGCACTTCAAGCGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCgg < 5:56079/129‑1 (MQ=255) gCCAGGCACTTCAAGCGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCCGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTTCGTCGCt > 2:187650/1‑149 (MQ=255) ccAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTTCGTCGCTg > 8:880/1‑149 (MQ=255) cAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGCCCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTTCGTCGCTGc > 8:10109/1‑149 (MQ=255) ggggcTTGCAGTGGCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAATCAGCACGATGGCGTCGGGCTTGATCCGTTGGCAGAGCATCGGAAGCTGCTTCA‑GCGGCTTCCGGTTGGGCAGCGTGATCACGCTTGTTGGGTGGCTGccg < 8:172910/146‑2 (MQ=255) gcgcTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTTCGTCGCTGcc > 1:152519/1‑147 (MQ=255) cgcTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCACGCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTTCGTCGCTGCCCa < 1:264763/149‑1 (MQ=255) cgcTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTTCGTCGCTGCCCAg < 2:152519/149‑1 (MQ=255) | GACGGGCCAGAAACTGCCGCAAGCGCTGGCGCATCACACTGCCCTGCGCGCCCAGGCAGGCTACAGGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTT‑CTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGTTCGCAGACCAGCGCAAGCTCCTGCA‑GCGGCTGCCCGTTCGCCAGCGGGATCACGCGTGTTTCGTCGCTGCCCAG > NC_002947/5253736‑5254030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |