Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,289,588 G→C 8.4% L246L (CTC→CTG) ‡ PP_4663 ← transmembrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,289,5880GC 8.4% 184.4 / 5.7 68L246L (CTC→CTG) ‡PP_4663transmembrane protein
Reads supporting (aligned to +/- strand):  ref base G (39/23);  new base C (4/2);  total (43/25)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01

GGCCGCGCTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGG  >  NC_002947/5289442‑5289727
                                                                                                                                                  |                                                                                                                                           
ggCCGCGCTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCTCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAg                                                                                                                                           >  5:103689/1‑149 (MQ=255)
  ccGCGCTGGAGGTGCACTCGGCCCTTCCTAACATGGCCGCATTCTTCGAAAAGCGGATGGAGTACCTGGAGCGCGATTTCGATATCCAGCGTTTCGACATGCTCAGCGCTTCGTCGGGTAACCGTTGATCAGCAGGGGGCCGCCGAgg                                                                                                                                          <  2:48960/148‑1 (MQ=255)
        tGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGggcggc                                                                                                                                     >  8:184155/1‑147 (MQ=255)
         ggACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCCTCGGCGGCCac                                                                                                                                  <  3:114634/149‑2 (MQ=255)
                     ggCCCGGCCGCACATGGCCGCCTGCTTCGAAAAGCGCCTGGACTCCCTGGCCCGCGATTCCTATATCCACCGGGGCGACATGCTCCGCGCTTCTTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGaaaaa                                                                                                                      <  4:256150/149‑1 (MQ=255)
                       cccTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGaaa                                                                                                                        <  3:102381/145‑1 (MQ=255)
                       cccTTCCGCACAAGCCCGCCTTATACCAAAAGCGAATGTACAACCTGGAGCGCTATTTCGATATCAAGAGGTTCGACATGCTCACCTCATCGTCAGCTAACCGTAGATCAGCAGATGGCCGCCGACGGCGGCCAGGCCGATGAAAAAg                                                                                                                     >  4:102381/1‑148 (MQ=255)
                        ccTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGATTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCTATGaaaaacaa                                                                                                                   >  7:223362/1‑146 (MQ=255)
                              gCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTGCGTCCGCTAACCGTTGATCAGCCGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCtt                                                                                                             <  3:327619/149‑1 (MQ=255)
                                    ggCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCTCGATTTCGATATACAGCGGGTCCACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCAGAGGTCGGCAAGGCCGATGAAAAAGCAACGCTTGAAaag                                                                                                       >  4:100259/1‑149 (MQ=255)
                                     gccgccTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGAGGGTCGACATGCTACGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTTGCCGCCGCCGGCCGCCAGGCCGATGAAAAAGCAACGCATGCAcag                                                                                                       >  1:274188/1‑148 (MQ=255)
                                      ccgccTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCCCTAACCGTTGTTCAGCAGGGGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAAcagca                                                                                                     <  2:87492/149‑1 (MQ=255)
                                       tgccTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCAAGGCCGATGAAAAAGCAACGCTTGAAcagcag                                                                                                    >  5:334443/2‑149 (MQ=255)
                                         ccTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAgcg                                                                                                  >  5:315692/1‑149 (MQ=255)
                                           ttcttcGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAgcgcg                                                                                                >  1:260827/1‑149 (MQ=255)
                                                     aGCGCATGGACTACCTGGAGCGCGATTTCTATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGAGCAGCAGGGGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCt                                                                                      <  8:216233/149‑1 (MQ=255)
                                                     aGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCt                                                                                      >  8:156319/1‑149 (MQ=255)
                                                            ggACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAg                                                                               >  3:151574/1‑149 (MQ=255)
                                                            ggACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAg                                                                               >  5:6088/1‑149 (MQ=255)
                                                             gACTACCTTGAGCGCGATTTCGATTTCCAGCGGGTCGACATGCTCAGGGCTTCGTCCGCTAACGGTTGATCAGCTGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGc                                                                              <  3:100259/149‑1 (MQ=255)
                                                             gACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGGGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGc                                                                              <  6:315692/149‑1 (MQ=255)
                                                                  ccTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAATCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAAcag                                                                                                       <  2:128420/119‑1 (MQ=255)
                                                                  ccTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAATCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAAcag                                                                                                       >  1:128420/1‑119 (MQ=255)
                                                                   cTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCa                                                                                <  6:113148/141‑1 (MQ=255)
                                                                   cTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCa                                                                                >  5:113148/1‑141 (MQ=255)
                                                                       aGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCg                                                                    <  7:156319/149‑1 (MQ=255)
                                                                          gcgATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCa                                                                 >  7:129022/1‑149 (MQ=255)
                                                                           cgATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGTCCCGCCAg                                                                >  3:55690/1‑149 (MQ=255)
                                                                            gttttCGATATCCAGCGGGTCGACTTGCTAAGGGCTTGGTCCGCTAACCGTTTATCTGCAGGTGGCCGCCGAGGGGGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGc                                                               <  6:6088/147‑1 (MQ=255)
                                                                              tttCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCAt                                                             >  1:132786/1‑149 (MQ=255)
                                                                                tCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATg                                                            <  5:162381/148‑1 (MQ=255)
                                                                                   atatCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGcc                                                          >  4:353423/1‑147 (MQ=255)
                                                                                    tatCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGTCCCGCCAGCATGCCGAg                                                       <  4:55690/149‑1 (MQ=255)
                                                                                      tCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGTCCGCCAGCATGCCGAGc                                                      <  2:260827/148‑1 (MQ=255)
                                                                                        cAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCaa                                                    <  7:184155/148‑1 (MQ=255)
                                                                                        cAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAg                                                   >  8:156139/1‑149 (MQ=255)
                                                                                        cAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAg                                                   >  1:45794/1‑149 (MQ=255)
                                                                                                 gACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGcc                                          >  7:185344/1‑149 (MQ=255)
                                                                                                 gACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGcc                                          >  4:335592/1‑149 (MQ=255)
                                                                                                    aTGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAg                                        >  7:256519/1‑148 (MQ=255)
                                                                                                      gCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCAt                                     >  2:316690/1‑149 (MQ=255)
                                                                                                        tCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCAt                                     >  7:183299/1‑147 (MQ=255)
                                                                                                        tCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCAt                                     >  6:85980/1‑147 (MQ=255)
                                                                                                        gcaccgcTTCTGCCGCAAACCTTTCATCACCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATca                                   <  8:270108/145‑1 (MQ=255)
                                                                                                          aGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAg                                        >  5:55040/1‑142 (MQ=255)
                                                                                                          aGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATcag                                  >  1:35583/1‑148 (MQ=255)
                                                                                                          aGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATca                                   <  5:85980/147‑1 (MQ=255)
                                                                                                              cTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGTAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCagcagc                              >  8:320457/1‑148 (MQ=255)
                                                                                                              cTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCg                             >  3:206489/1‑149 (MQ=255)
                                                                                                                      gCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCgtgcaaac                      >  3:149225/1‑141 (MQ=255)
                                                                                                                       cTAACCGTTCATCACGTGGTGGCCGCGGTGGGCGGCCAGGCCGATGAAAAAGCAACTCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCa                    <  8:183299/149‑1 (MQ=255)
                                                                                                                            cGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCCGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGcc               >  4:48754/1‑149 (MQ=255)
                                                                                                                             gTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCt              >  6:265981/1‑149 (MQ=255)
                                                                                                                                gATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTgg            <  6:103689/148‑1 (MQ=255)
                                                                                                                                 aTCAGCAGGGGGCCGCCGATGGCGGCCATGCCGATGAAAAAGCAACGCGTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGc           <  2:35583/148‑1 (MQ=255)
                                                                                                                                     gcagGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAg                                                   >  6:365056/1‑104 (MQ=255)
                                                                                                                                     gcagGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAg                                                   <  5:365056/104‑1 (MQ=255)
                                                                                                                                     gcagGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCAcc       >  4:162757/1‑148 (MQ=255)
                                                                                                                                     gcagGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCAcc       >  8:206909/1‑148 (MQ=255)
                                                                                                                                     gcagGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCAcc       >  8:208819/1‑148 (MQ=255)
                                                                                                                                       gcctGGCCGCCCTCGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCa                                                     >  8:123154/4‑100 (MQ=255)
                                                                                                                                       gcctGGCCGCCCTCGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCa                                                     <  7:123154/97‑1 (MQ=255)
                                                                                                                                       gcctGGCCGCCCTCGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCAccc      >  3:289415/4‑147 (MQ=255)
                                                                                                                                        ggTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAg   >  3:197828/1‑149 (MQ=255)
                                                                                                                                        cctGGCCGCCCTCGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGAGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAg   >  2:351885/3‑149 (MQ=255)
                                                                                                                                         gTGGCCGCCGTGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAg   <  4:206489/148‑1 (MQ=255)
                                                                                                                                         gTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAgg  >  2:278662/1‑149 (MQ=255)
                                                                                                                                          tGGCCGCCCTCGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCCAGGCCGGCGCCAGCAGCAGCAGCGACGCCCCCAGCGCCGGGCCCCCCAAgg  >  5:264157/1‑148 (MQ=255)
                                                                                                                                              cgccgAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAg                                                   >  7:272480/1‑95 (MQ=255)
                                                                                                                                              cgccgAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAg                                                   <  8:272480/95‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                           
GGCCGCGCTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGG  >  NC_002947/5289442‑5289727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑