| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,434,737 | A→G | 5.8% | V176A (GTG→GCG) | hrpB ← | ATP‑dependent helicase HrpB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,434,737 | 0 | A | G | 5.8% | 202.7 / 2.5 | 69 | V176A (GTG→GCG) | hrpB | ATP‑dependent helicase HrpB |
| Reads supporting (aligned to +/- strand): ref base A (33/32); new base G (2/2); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.55e-01 | |||||||||||
CCAGGCAGGAACACCAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAGTGCGAGATCGGCATCCAGGCTGCGCTCGT > NC_002947/5434590‑5434884 | ccAGGCAGGAACACCAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGaccac > 1:166014/1‑149 (MQ=255) caggcaggAACACCAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGaccacc > 7:47499/1‑149 (MQ=255) ggAACACCAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCa < 2:166014/149‑1 (MQ=255) acacCAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGGACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCg > 4:89420/1‑149 (MQ=255) acCAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTc > 2:340768/1‑149 (MQ=255) cAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCa < 5:51325/149‑1 (MQ=255) cAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCa < 7:11938/149‑1 (MQ=255) cACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCCGCGGATATCCACCGGATGCATGCGGCCGTCGCTGCTGACCACCGGGGCATCGTCCAGc > 5:300520/1‑148 (MQ=255) cTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACcg < 1:128809/149‑1 (MQ=255) ggTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGt > 8:173375/1‑149 (MQ=255) tCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTc > 2:114168/1‑149 (MQ=255) gccagcGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGcc > 5:81158/1‑149 (MQ=255) ccagcGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCg > 8:28167/1‑122 (MQ=255) ccagcGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCg < 7:28167/122‑1 (MQ=255) cagcGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCtt > 6:327622/1‑149 (MQ=255) agcGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTc < 7:35694/149‑1 (MQ=255) gcgtGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAg < 5:142688/146‑1 (MQ=255) cATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAgg < 1:340768/149‑1 (MQ=255) aTGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAggg < 7:173375/149‑1 (MQ=255) aTGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGCATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAggg > 4:286938/1‑149 (MQ=255) aaCACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTcgc > 8:161706/1‑149 (MQ=255) aaCACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTcgc < 5:298268/149‑1 (MQ=255) cacGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCgg > 5:361682/1‑149 (MQ=255) cGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGa > 8:85694/1‑148 (MQ=255) cGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGAc < 6:81158/149‑1 (MQ=255) gCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGTAc > 3:258905/1‑148 (MQ=255) cAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACa > 1:68705/1‑148 (MQ=255) aGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACAt > 4:321133/1‑148 (MQ=255) tCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATcag < 8:47499/149‑1 (MQ=255) caccacCCGTGGCTCAATGAACTTGCCTGGCTGGAACGGCCGCCCCCAGGGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGGCGCGGACATcagca < 3:345734/149‑1 (MQ=255) caccacCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTcgcg > 4:125034/1‑139 (MQ=255) caccacCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTcgcg < 3:125034/139‑1 (MQ=255) caccacCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATcagca < 6:361682/149‑1 (MQ=255) caccacCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATcagc < 1:297433/148‑1 (MQ=255) caccCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGa > 5:274401/1‑148 (MQ=255) ccGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCt > 3:135931/1‑149 (MQ=255) ccGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCt > 5:340602/1‑149 (MQ=255) cGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCtt < 6:274401/149‑1 (MQ=255) aTGAACTCGCCTGGCTGGGACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCgg < 3:89420/149‑1 (MQ=255) tCGCCTGGCTGGAACGGAAGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACAGCGCCAGGCGTTAGACTTCCAGGGTCGCGGACATCAGCAGAATATTCAGTGGCTGgtcgt > 8:19998/1‑148 (MQ=255) gCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGaa < 4:314165/128‑1 (MQ=255) gCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGaa > 3:314165/1‑128 (MQ=255) gCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCa < 2:68705/148‑1 (MQ=255) ccTGTCGGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCATTAGCTGCTGACCACCGGGGCATCGTCCAGCAACAGCGACAGGCGTTCTCCTTCCAGGGTCTCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACg < 7:19998/149‑1 (MQ=255) ccTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACg < 7:85694/149‑1 (MQ=255) gctggAACGGCCGCCCCCAGCGGATATCCACCGGATGCGTGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACgcag > 4:344279/1‑148 (MQ=255) gctggAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACgcag < 4:135931/148‑1 (MQ=255) gAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACt > 2:134787/1‑149 (MQ=255) aaCGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTc > 4:298438/1‑149 (MQ=255) aCGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTcg > 4:245634/1‑149 (MQ=255) cGGCCGCCCCCAGCGGATATCCACCGGATGCGTGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTcgc < 3:344279/149‑1 (MQ=255) cGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTcgc < 3:245634/149‑1 (MQ=255) ggCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTc < 4:177171/99‑1 (MQ=255) ggCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTc > 3:177171/1‑99 (MQ=255) gccgccCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCgg < 5:327622/149‑1 (MQ=255) ccccAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCGCCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACgcag > 8:103462/1‑134 (MQ=255) ccccAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCGCCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACgcag < 7:103462/134‑1 (MQ=255) ccAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGgtc > 8:2898/1‑123 (MQ=255) ccAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGgtc < 7:2898/123‑1 (MQ=255) ccAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTaa < 1:134787/149‑1 (MQ=255) ccACCGGATGCATGCGGCCTTCGCTGCTGACCGCCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAgcgc > 4:214102/1‑148 (MQ=255) ccACCGGATGCATGCGGCCTTCGCTGCTGACCGCCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAgcgc < 3:214102/148‑1 (MQ=255) cACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCaa < 7:101758/149‑1 (MQ=255) cACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCGTCAGTTGCGGGTCGTCACGCAGCAACTCGCGGGCGGTAAGGCTCAgcgc > 6:278010/1‑147 (MQ=255) cACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAAGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGCCTCAgcgc > 6:184151/1‑147 (MQ=255) aCCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAg > 5:275469/1‑149 (MQ=255) ccGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAGt > 1:18828/1‑149 (MQ=255) atgcGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAGTGc > 6:330419/1‑143 (MQ=255) atgcGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAGTGCGAGATc < 3:286938/149‑1 (MQ=255) cGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAGTGCGAGATCgg > 6:325346/1‑148 (MQ=255) agctgACCACCGGGGCATCGTCCAGCTACCGCGACAGGCGGTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCATCAGTGGCGGGGCGTCACGCAGCAACTGGCGGCCGTTAAGGCTCAGCGCAAGTGCGAGATCGGCATCCAGGCTg < 6:300520/148‑1 (MQ=255) caccGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAGTGCGAGATCGGCATCCAGGCTGCGCTCGt > 6:343281/1‑149 (MQ=255) accGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAGTGCGAGATCGGCATCCAGGCTGCGCTCGt > 7:176167/1‑148 (MQ=255) | CCAGGCAGGAACACCAGCACGCTGCCGGCCTGGTCAGCCAGCGCATGCAACACGCAGTCCACCACCCGTGGCTCAATGAACTCGCCTGGCTGGAACGGCCGCCCCCAGCGGATATCCACCGGATGCATGCGGCCTTCGCTGCTGACCACCGGGGCATCGTCCAGCAACCGCGACAGGCGTTCGCCTTCCAGGGTCGCGGACATCAGCAGAATCTTCAGTGGCGGGTCGTCACGCAGCAACTCGCGGCCGTTAAGGCTCAGCGCAAGTGCGAGATCGGCATCCAGGCTGCGCTCGT > NC_002947/5434590‑5434884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |