| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,529,201 | A→T | 5.5% | intergenic (‑415/+179) | ydfG ← / ← livF‑II | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,529,201 | 0 | A | T | 5.5% | 224.8 / 2.5 | 72 | intergenic (‑415/+179) | ydfG/livF‑II | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (36/32); new base T (2/2); total (38/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
TCCAAGGTTTTTACACAGAGTTATCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAG > NC_002947/5529066‑5529347 | tCCAAGGTTTTTACACAGAGTTATCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCtt > 6:62697/1‑147 (MQ=255) cAAGGTTTTTACACAGAGTTATCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑Gc > 8:212311/1‑149 (MQ=255) aaGGTTTTTACACAGAGTTATCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑Gc > 6:85621/1‑148 (MQ=255) aGGTTTTTACACAGACTTATCCACAGGATTGGCACTGCACTTGCAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGa < 4:114986/149‑1 (MQ=255) ttAAACAGAGTTATCGAGAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTTGGATAATCATCCACAACGGTGATATGAACAAAAATTGATCAAATCGCTCAAGGCCTTGAGTATCAAGCCCTGT‑‑‑‑A‑GCGATTTga < 4:352134/148‑2 (MQ=21) acacAGAGTTATCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTCAAGGCCTTGAGTATCAAGCCCTGT‑‑‑‑A‑GCGATTTgatc < 6:297480/148‑4 (MQ=37) ttATCCACAGGATTGGCACTGCACATGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCAACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGtttt > 8:55768/1‑149 (MQ=255) aTCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTc > 5:9747/1‑148 (MQ=255) aTCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTc < 7:212311/148‑1 (MQ=255) tCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTcc < 5:85621/148‑1 (MQ=255) ggATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGTAAAATCATCCACAACGGGTATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAggc < 2:179520/148‑1 (MQ=255) ttGGAACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCt < 5:62697/149‑1 (MQ=255) ggCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACGATGTTTTCCACAGGCGGCTc < 3:36970/148‑1 (MQ=255) actgcactTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCcaca > 2:300515/1‑149 (MQ=255) ctgcactTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCacac > 5:32523/1‑149 (MQ=255) ctgcactTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCacac > 3:177420/1‑149 (MQ=255) tgcactTGAAGCACACGTAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCccac > 8:253724/1‑148 (MQ=255) cacaTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACt < 7:55768/147‑1 (MQ=255) acGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATAGCTAAAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCAACATGTTTTCCACAGGCGGCTCCACACTATCCGTGGaa > 1:266575/1‑145 (MQ=255) gCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGt > 6:118082/1‑149 (MQ=255) gCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGt > 4:74612/1‑149 (MQ=255) gCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGt > 1:184475/1‑149 (MQ=255) agagATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTg > 3:175025/1‑149 (MQ=255) gagaTGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTgg < 4:339090/149‑1 (MQ=255) aTGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCt < 5:118082/149‑1 (MQ=255) tGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCtgtg > 3:73016/1‑148 (MQ=255) gAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGACGGCTCCACACTATCCGTGGAAAAGAGTTGGCCtgt < 3:151321/146‑1 (MQ=255) gAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGACGGCTCCACACTATCCGTGGAAAAGAGTTGGCCtgt > 4:151321/1‑146 (MQ=255) ggAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATgg < 4:73016/148‑1 (MQ=255) aaaaTCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCtt > 8:247289/1‑149 (MQ=255) aaaTCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTg < 8:186800/149‑1 (MQ=255) atcCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGaa < 1:181611/148‑1 (MQ=255) atcCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAg < 8:34010/149‑1 (MQ=255) cacaACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGaa > 3:138546/1‑149 (MQ=255) acaACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCtgtg > 8:102128/1‑126 (MQ=255) acaACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCtgtg < 7:102128/126‑1 (MQ=255) acaACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGaa > 7:42017/1‑148 (MQ=255) aCGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATg < 8:42017/149‑1 (MQ=255) cGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATgg > 7:126076/1‑149 (MQ=255) gggATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGgt < 4:177420/149‑1 (MQ=255) gggATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGgt < 6:32523/149‑1 (MQ=255) gAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTc > 3:225470/1‑149 (MQ=255) aaCAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCg > 8:181986/1‑149 (MQ=255) aaCAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCg > 2:292815/1‑149 (MQ=255) aCAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATgg > 2:49356/1‑138 (MQ=255) aCAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATgg < 1:49356/138‑1 (MQ=255) aCAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCg < 7:247289/148‑1 (MQ=255) aCAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCg < 4:138546/148‑1 (MQ=255) cAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCgg > 2:325375/1‑148 (MQ=255) cAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCgg > 7:339083/1‑148 (MQ=255) aaaaaTTATCAAATCGCTTCATGTCTTGTTACTAAAGGCCTTGTCTAACCCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTc < 1:300515/149‑1 (MQ=255) tGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTAt > 6:327272/1‑80 (MQ=255) tGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTAt < 5:327272/80‑1 (MQ=255) tGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAgg > 6:6000/1‑148 (MQ=255) gATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAggg > 2:42169/1‑148 (MQ=255) ataTCGCTCAAGGCCTTGAGTATCAAGCCCTGT‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGTGTGTGTTTCGGGAGAAGGGAAc > 6:250027/3‑147 (MQ=37) ataTCGCTCAAGGCCTTGAGTATCAAGCCCTGT‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGa > 3:2622/3‑149 (MQ=38) aaTCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTgg < 2:248038/98‑1 (MQ=255) aaTCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTgg > 1:248038/1‑98 (MQ=255) aTCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAggg < 4:171860/142‑1 (MQ=255) aTCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAggg > 3:171860/1‑142 (MQ=255) tACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGttt > 7:109121/1‑149 (MQ=255) cAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGtttt < 7:253724/148‑1 (MQ=255) cAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTc < 3:74612/149‑1 (MQ=255) cAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTc < 1:42169/149‑1 (MQ=255) aGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTcc < 5:6000/149‑1 (MQ=255) gggCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCca < 1:325375/149‑1 (MQ=255) gggCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCca < 4:175025/149‑1 (MQ=255) gCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCcaca > 7:319627/1‑149 (MQ=255) tGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACAtt > 3:59583/1‑148 (MQ=255) gATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCTCAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACAtt < 1:183157/147‑1 (MQ=255) gATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACAtt > 4:132887/1‑147 (MQ=255) aCTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTgag > 6:78366/1‑147 (MQ=255) | TCCAAGGTTTTTACACAGAGTTATCCACAGGATTGGCACTGCACTTGAAGCACACGCAGAGATGTTGAAAGCTTGGGAAAATCATCCACAACGGGGATATGAACAAAAAATGATCAAATCGCTACAGGGCTTGATACTCAAGGCCTTG‑‑‑‑A‑GCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAG > NC_002947/5529066‑5529347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |