| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 78,507 | G→C | 9.2% | intergenic (‑35/+26) | fmt ← / ← def‑I | methionyl‑tRNA formyltransferase/peptide deformylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 78,507 | 0 | G | C | 9.2% | 260.3 / 14.3 | 87 | intergenic (‑35/+26) | fmt/def‑I | methionyl‑tRNA formyltransferase/peptide deformylase |
| Reads supporting (aligned to +/- strand): ref base G (39/40); new base C (4/4); total (43/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.41e-01 | |||||||||||
CCGGCCGGGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACGCACAC > NC_002947/78360‑78652 | ccggccggGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCg > 8:327432/1‑148 (MQ=255) cggGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCaa < 1:162725/149‑1 (MQ=255) gCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGcc < 3:71902/149‑1 (MQ=255) ggTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCtt > 4:196856/1‑149 (MQ=255) gTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTc < 7:327432/149‑1 (MQ=255) tCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTTAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCa < 8:100272/149‑1 (MQ=255) tCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCtt > 8:52263/1‑147 (MQ=255) tCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCa < 8:105291/149‑1 (MQ=255) tCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCa < 4:290005/149‑1 (MQ=255) gggCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAgg < 5:180866/149‑1 (MQ=255) cTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAg < 8:314344/149‑1 (MQ=255) gggTGTAGACGGCCACGAACTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGTGTGGCTGCATAGGCGATGCGCATGGAGTTCTGGCTTCAAATAAGAAAATGGCTTGCCGGAGCAAGCCTGCAGGAAGGt > 8:173303/1‑149 (MQ=255) ggTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTg < 3:7838/149‑1 (MQ=255) gtgtAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTgg > 5:19523/1‑149 (MQ=255) tAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAgg > 1:179010/1‑139 (MQ=255) tAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAgg < 2:179010/139‑1 (MQ=255) tAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGa > 6:347168/1‑149 (MQ=255) gACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGAt > 8:165281/1‑148 (MQ=255) cGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGc < 5:173814/149‑1 (MQ=255) cGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGc < 2:190172/149‑1 (MQ=255) cGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCTCCGGCAAGCCtttt > 6:312854/1‑119 (MQ=255) cGTAGGGGCTGTCCAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCTCCGGCAAGCCtttt < 5:312854/121‑3 (MQ=255) gTAGGGGCTGTCGAGCATGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGa < 7:173303/148‑1 (MQ=255) gTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTgg < 7:165281/145‑1 (MQ=255) gTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGa < 3:196856/148‑1 (MQ=255) gTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGAt > 6:267506/1‑149 (MQ=255) aGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGc < 8:270136/140‑1 (MQ=255) aGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGc > 7:270136/1‑140 (MQ=255) tCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑Tc > 2:282311/1‑149 (MQ=255) cGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCa > 3:38899/1‑124 (MQ=255) cGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCa < 4:38899/124‑1 (MQ=255) gAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑Tc > 1:281386/1‑147 (MQ=255) ggCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGcttct < 8:214207/149‑1 (MQ=255) ccTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTgg > 6:272905/1‑109 (MQ=255) ccTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTgg < 5:272905/109‑1 (MQ=255) ccTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGcttcttc < 7:52263/149‑1 (MQ=255) gAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGcttcttctt < 4:306082/147‑1 (MQ=255) tCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTc > 4:42037/1‑149 (MQ=255) tCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTc > 1:253053/1‑149 (MQ=255) cggcggCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTggg < 6:231093/98‑1 (MQ=255) cggcggCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTggg > 5:231093/1‑98 (MQ=255) aaaCTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCtt > 6:224467/1‑147 (MQ=255) aaCTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAg > 3:308545/1‑149 (MQ=255) tctGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGcttcttctt < 7:52613/128‑1 (MQ=255) tctGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGcttcttctt > 8:52613/1‑128 (MQ=255) tctGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTg > 8:235525/1‑149 (MQ=255) tGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTg < 3:42037/147‑1 (MQ=255) gAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGc < 7:41607/146‑1 (MQ=255) gAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGAc < 5:347168/149‑1 (MQ=255) gAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCAGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGa > 3:175099/1‑141 (MQ=255) gTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAg > 2:71667/1‑149 (MQ=255) tGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAgg < 4:308545/149‑1 (MQ=255) ccTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTa < 2:253053/149‑1 (MQ=255) tGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTg > 7:308255/1‑133 (MQ=255) tGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTg < 8:308255/133‑1 (MQ=255) tGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGt > 7:305735/1‑149 (MQ=255) tGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGt > 4:266709/1‑149 (MQ=255) cAAAGACGATGCGCATGGAGGTCTCGCTTCAAAAAAGAAACAGGCTTGCCGGAGCAAGCCTTCAGGAAGGGGGGGATCAGGCTTGCGGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTc < 7:157261/148‑1 (MQ=255) aaGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTcgac < 6:19523/149‑1 (MQ=255) aCGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGGTTT‑‑TCCAGCTTCTTCTTGATCCGGTCTCGCTTGAGCTGAGACAGGTAGTCGACGaa > 8:157425/1‑149 (MQ=255) gATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGAtgc < 4:280762/88‑1 (MQ=255) gATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGAtgc > 3:280762/1‑88 (MQ=255) gATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGaa > 3:170148/1‑147 (MQ=255) aTGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAg > 6:5984/1‑149 (MQ=255) gAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGtt < 4:170148/149‑1 (MQ=255) tcGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTc < 6:178866/101‑1 (MQ=255) tcGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTc > 5:178866/1‑101 (MQ=255) gCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGAt > 4:98483/1‑149 (MQ=255) aaaaaaGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAAt > 2:158588/1‑149 (MQ=255) aaaaaaGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TACAGCTTCTTCTTCATCCGGTAGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGCTCGAAt > 2:222540/1‑149 (MQ=255) aaaaagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGaa > 8:11148/1‑123 (MQ=255) aaaaagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGaa < 7:11148/123‑1 (MQ=255) aagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGt < 5:224467/149‑1 (MQ=255) aagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGt < 2:281386/149‑1 (MQ=255) agaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTg < 6:129354/149‑1 (MQ=255) gaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGt > 7:262996/1‑147 (MQ=255) gaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGt < 8:262996/147‑1 (MQ=255) tgaagGCTTGCTCCGGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAg < 3:98147/129‑1 (MQ=255) tgaagGCTTGCTCCGGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAg > 4:98147/3‑131 (MQ=255) gaagGCTTGCTCCGGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGa < 1:29378/128‑1 (MQ=255) gaagGCTTGCTCCGGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGa > 2:29378/2‑129 (MQ=255) gaagGCTTGCTCCGGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAg < 2:138612/129‑1 (MQ=255) gaagGCTTGCTCCGGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAg > 1:138612/2‑130 (MQ=255) aaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTAGGCCAGGTGGTAATTGATCCGGTCCCGCTTGAGATGCGCCAGGTATTCGACTAACACCTTGCCGTTGAGGTGAGCGAATTCGTgat > 1:287921/1‑147 (MQ=255) gCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGGTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACg > 4:82272/1‑148 (MQ=255) gCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTTAGCTGCGACAGGTTGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTTCg > 8:332873/1‑148 (MQ=255) gCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACg > 4:146696/1‑148 (MQ=255) ccGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACGCacac < 1:282311/148‑1 (MQ=255) | CCGGCCGGGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTT‑‑TCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACGCACAC > NC_002947/78360‑78652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |