| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 494,525 | C→A | 5.6% | R96R (CGG→AGG) | djlA → | DnaJ‑like protein DjlA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 494,525 | 0 | C | A | 5.6% | 225.5 / 3.5 | 71 | R96R (CGG→AGG) | djlA | DnaJ‑like protein DjlA |
| Reads supporting (aligned to +/- strand): ref base C (31/36); new base A (2/2); total (33/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.93e-01 | |||||||||||
ACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTGGGCTGACGGCAAGATGG > NC_002947/494377‑494672 | aCGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGccc > 7:307503/1‑149 (MQ=255) gtgggCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTgcgc < 2:264957/149‑1 (MQ=255) tGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATg > 8:317183/1‑149 (MQ=255) ttACGCGTCGACTAGTTGTTGTTCGTGTTGCTCTGGCGGCTGTCCATGTGCGATGGCCGGGTAGCCGAGAAGCATTTCCAGCATGCGCGTCAGTAGATGGTGCGCCTGGACCTGGCAGAGGCAGGCCGGTTGCGCGCCATCAATGCGtt < 3:168262/149‑1 (MQ=255) gcgACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAAc > 4:256033/1‑149 (MQ=255) cgacgaGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTg < 7:317183/149‑1 (MQ=255) gacgaGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTgg < 4:164541/149‑1 (MQ=255) gacgaGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTgg < 7:243815/149‑1 (MQ=255) gaGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGc > 4:255448/1‑147 (MQ=255) ttgttgttCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGc > 8:35968/1‑149 (MQ=255) ttgatCGTGATGCTCGGGCGCCTGGCAAAGTGCGATGGCCCGGAAGCCGAGCAGAATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGAAGAGTAAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGAGGCAAGGCggg > 6:288750/1‑149 (MQ=255) gttCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCg < 1:360567/135‑1 (MQ=255) gttCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCg > 2:360567/1‑135 (MQ=255) gttCGTGATGCTCGGGCGCCTGGCCAAGTGAGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGc > 4:345018/1‑148 (MQ=255) ttCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCaa < 7:264960/149‑1 (MQ=255) ttCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCaa < 5:288750/149‑1 (MQ=255) gTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGa > 6:32279/1‑149 (MQ=255) aTGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGAcc < 8:79650/148‑1 (MQ=255) gCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCgg < 5:36607/137‑1 (MQ=255) gCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCgg > 6:36607/1‑137 (MQ=255) gCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCgg < 4:327073/148‑1 (MQ=255) gggCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCtt < 7:324223/147‑1 (MQ=255) cgcCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCgg < 3:256033/149‑1 (MQ=255) cgcCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCgg < 8:307503/149‑1 (MQ=255) cTGGCCAAGTGCGATGGCCGGGTAGCCGCGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCAGGTTggca > 3:55933/1‑93 (MQ=255) cTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGTCAGCCAGGTTggca < 4:55933/96‑4 (MQ=255) cTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCa > 8:116827/1‑149 (MQ=255) cTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCAGGTTggca < 2:119385/96‑4 (MQ=255) cTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCAGGTTggca > 1:119385/1‑93 (MQ=255) gCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCt > 7:291451/1‑149 (MQ=255) aGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAAcc > 3:95077/1‑108 (MQ=255) aGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAAcc < 4:95077/108‑1 (MQ=255) gTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTgcggc > 6:21613/1‑149 (MQ=255) gATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCAt > 6:182742/1‑149 (MQ=255) gATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCAt < 7:116827/149‑1 (MQ=255) gATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGCCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAAGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCa > 1:297969/1‑148 (MQ=255) ggCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCa > 8:174463/1‑145 (MQ=255) ggCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCa < 7:174463/145‑1 (MQ=255) ccGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCAtcagt > 5:223655/1‑148 (MQ=255) cGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCAtcagtca < 7:35968/149‑1 (MQ=255) gTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGCCACCAGAGGCGCAtcagtcag > 6:250788/1‑147 (MQ=255) ccGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTcag‑cag > 4:189453/1‑146 (MQ=255) ccGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTcag‑cag < 3:189453/146‑1 (MQ=255) gAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCa > 3:163047/1‑149 (MQ=255) caTATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACgcggc < 4:106394/149‑1 (MQ=255) atCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGcggcgg > 3:268177/1‑148 (MQ=255) ccAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCg < 6:117490/99‑1 (MQ=255) ccAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCg > 5:117490/1‑99 (MQ=255) ccAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTgcg < 1:346840/117‑1 (MQ=255) ccAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTgcg > 2:346840/1‑117 (MQ=255) cagcagGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAg < 5:21613/148‑1 (MQ=255) agcagGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGcggcgg > 4:130582/1‑144 (MQ=255) agcagGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGcggcgg < 3:130582/144‑1 (MQ=255) agcagGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAgg > 3:208461/1‑148 (MQ=255) agGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTAcc < 1:228626/149‑1 (MQ=255) tCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAGACAGCCCCACGCGGCGGAAGGTACCTTGCg < 1:26381/148‑1 (MQ=255) tCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCg > 2:26381/1‑147 (MQ=255) aGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGc < 4:268177/148‑1 (MQ=255) ggAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCt < 4:198451/149‑1 (MQ=255) ggAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCt > 4:85493/1‑149 (MQ=255) aTGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTg < 4:163047/149‑1 (MQ=255) ggTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGgc > 4:314044/1‑149 (MQ=255) gcgcCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCAtcagtc < 6:343353/104‑1 (MQ=255) gcgcCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCAtcagtc > 5:343353/1‑104 (MQ=255) cTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGt > 4:217504/1‑149 (MQ=255) ggACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTcag‑ca < 5:182301/102‑1 (MQ=255) ggACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTcag‑ca > 6:182301/1‑102 (MQ=255) gACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAAGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTg < 2:297969/149‑1 (MQ=255) aCCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTgg < 3:255448/149‑1 (MQ=255) ccTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTggg < 5:32279/149‑1 (MQ=255) ccTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTggg < 5:182742/149‑1 (MQ=255) gCCCGGTTGCGCGCCATCAATGCGTTCAACCGGGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCTGCGCATCAGTCAT‑CAGCGCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTGGGCTGACGGCAAGAt < 5:250788/149‑1 (MQ=255) cccGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTGGGCTGACGGCAAGATg > 4:181267/1‑149 (MQ=255) ccGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTGGGCTGACGGCAAGATgg < 4:208461/149‑1 (MQ=255) | ACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGACCTGGCCGAGGCAGCCCGGTTGCGCGCCATCAATGCGTTCAACCGTGGCAAGGCGGGCAAGGACCGGCTTGGCGGGCACCTGCGGCGCATCAGTCAG‑CAGCCCCACGCGGCGGAAGGTACCTTGCGGGCCTGTTGGCGCATGGTCTGGGCTGACGGCAAGATGG > NC_002947/494377‑494672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |