| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,048,910 | C→G | 7.1% | T32S (ACC→AGC) | rpoZ → | DNA‑directed RNA polymerase subunit omega |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,048,910 | 0 | C | G | 7.1% | 297.8 / 8.4 | 97 | T32S (ACC→AGC) | rpoZ | DNA‑directed RNA polymerase subunit omega |
| Reads supporting (aligned to +/- strand): ref base C (44/46); new base G (4/3); total (48/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.48e-01 | |||||||||||
CGCCTGCCCATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTCGCCGCGTTCGA > NC_002947/6048763‑6049054 | cGCCTGCCCATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGAc < 7:33579/148‑1 (MQ=255) gCCTGCCCATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACcg > 8:156845/1‑149 (MQ=255) gCCTGCCCATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACcg > 3:127898/1‑149 (MQ=255) ccTGCCCATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGAGcgc < 5:313034/149‑2 (MQ=255) cTGCCCATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACcggc < 2:27048/149‑1 (MQ=255) cccATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGGTCGCCAGCTGGCGAGcgcg > 1:193258/1‑144 (MQ=255) cccATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGGTCGCCAGCTGGCGAGcgcg < 2:193258/146‑3 (MQ=255) cccATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACcggcgg > 4:96688/1‑148 (MQ=255) cccATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACcggcg < 4:127898/147‑1 (MQ=255) cccATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACcggcg < 2:106547/147‑1 (MQ=255) cccATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACcggcg < 2:102097/147‑1 (MQ=255) ccATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCggcggc > 8:335510/1‑148 (MQ=255) cATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCa > 7:34673/1‑148 (MQ=255) cACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGtt < 8:139671/149‑1 (MQ=255) cGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGc < 3:167367/149‑1 (MQ=255) cccACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGt < 6:98724/149‑1 (MQ=255) cccACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGt < 7:156845/149‑1 (MQ=255) cACCGCAATTGCTACTGAGGAAGCCCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCNACCGGCGGCAAAGAGCCACGCGTTGCGTgg < 1:33093/149‑1 (MQ=255) cACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTgg < 7:335510/149‑1 (MQ=255) cACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACAGCTATGAGCTGGACATCCTCTCGACCAAGCGCGCTCGCCAGCTGGCGCCCGGCGGAAAAGAGCCACGCGTTGCGTgg > 4:74141/1‑149 (MQ=255) cACCGCAATTGCTACTGAGGAAGACAATGGCCCGAGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTTAGCTTTTAATGATCTCTACAAAGCTCGCTCGCCATCTGGCTACAGTCGGCAAAGAGCCACGCGTTGCGTgg < 1:27515/149‑1 (MQ=255) aTTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCAACGCGTggctctttg < 4:174116/149‑8 (MQ=255) cTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTgg < 3:174341/138‑1 (MQ=255) cTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTgg < 3:169032/138‑1 (MQ=255) cTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTgg > 4:169032/1‑138 (MQ=255) cTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTgg > 4:174341/1‑138 (MQ=255) tACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAg > 4:33397/1‑149 (MQ=255) cTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGAGCGGAGGCAAAGAGCCACGAGTTGCGTGGGAAATCGACAAGc > 6:20021/1‑148 (MQ=255) aGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCaa < 7:145765/148‑1 (MQ=255) aGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCaa < 3:33397/148‑1 (MQ=255) ggAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAAcc > 7:49152/1‑149 (MQ=255) aCCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTGTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGCGCCACGCGTTGCGTGGGAAAACGACAAGCCCACCgttgt > 2:303832/1‑149 (MQ=255) ccATGGCCCGCGTAACTGTTGCAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTTGTCATGCTCTCGACCAAGCGCTCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGATAACGACAAGCCAACCgttgtt < 3:74141/149‑1 (MQ=255) ccATGGCCCGCGTAACTGTTGAAGACTGCCTCGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAACTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCAAACCgttgtt > 3:48877/1‑149 (MQ=255) ccGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGc > 4:22457/1‑149 (MQ=255) ccGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGc > 5:220395/1‑149 (MQ=255) cgcgTAACGGTTGAAGACTCCCTGGAACACGGGGATAACCGCTTTGCGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCg < 6:57296/149‑1 (MQ=255) cgTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGc < 1:135539/111‑1 (MQ=255) cgTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGc > 2:135539/1‑111 (MQ=255) aCTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGATCTGGTCATGCTCTCTACCAAGCGCGCTCGCCAGCTGGCTACCGGCGGCAAAGAGCCACGCTTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGaaa < 5:20021/148‑1 (MQ=255) cTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAAtt < 6:220395/149‑1 (MQ=255) ttGAAGACTTCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGc < 1:95532/148‑1 (MQ=255) aGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGaaaa < 4:214448/108‑1 (MQ=255) aGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGaaaa > 3:214448/1‑108 (MQ=255) aGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAg < 3:22457/149‑1 (MQ=255) ccTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAAc > 4:335597/1‑103 (MQ=255) ccTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAAc < 3:335597/103‑1 (MQ=255) gAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCAc < 1:253153/149‑1 (MQ=255) acGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAAc < 8:49152/149‑1 (MQ=255) acGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAAc > 8:75115/1‑149 (MQ=255) cGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAAc > 7:193733/1‑148 (MQ=255) gTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAAc > 7:98666/1‑147 (MQ=255) gTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAAc > 6:269743/1‑147 (MQ=255) tgcaTAACCGCGTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAg < 8:237130/146‑1 (MQ=255) tGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAg > 3:137876/1‑149 (MQ=255) gATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGt < 3:96688/148‑1 (MQ=255) attagcGCTTTGATCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGTGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTc < 1:306894/144‑1 (MQ=255) aaCCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCAt > 5:277018/1‑149 (MQ=255) ccGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAAtt > 2:41090/1‑118 (MQ=255) ccGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAAtt < 1:41090/118‑1 (MQ=255) cGCTTTGAGCTGGTCATGCTCTCGACCAAGCGGGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCAcc < 4:326652/135‑1 (MQ=255) cGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCAcc > 3:326652/1‑135 (MQ=255) gCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGaa < 1:93029/113‑1 (MQ=255) gCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGaa > 2:93029/1‑113 (MQ=255) cTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCgtt > 5:233680/1‑97 (MQ=255) cTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCgtt < 6:233680/97‑1 (MQ=255) aGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGaa < 8:34673/149‑1 (MQ=255) gCTGGTCATGCTCTCGACCAAGCGCGCTCTCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAag < 7:75115/149‑1 (MQ=255) cTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGaa > 3:332185/1‑147 (MQ=255) tGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAAt < 1:82940/106‑1 (MQ=255) tGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAAt > 2:82940/1‑106 (MQ=255) tGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGaa > 3:306426/1‑146 (MQ=255) gTCATGCTCTCGACCAAGCGCGCTCGCCAACTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAagag < 4:48877/147‑1 (MQ=255) gCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGaa < 5:79541/139‑1 (MQ=255) gCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGaa > 6:79541/1‑139 (MQ=255) gACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCg < 5:269743/146‑1 (MQ=255) aGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCg > 8:204705/1‑149 (MQ=255) gcgcgcTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCgg > 3:112927/1‑149 (MQ=255) cgccggtCGCCAGCTGGCGAGCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCgg > 6:359866/7‑149 (MQ=255) gccgcTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAg < 6:331923/92‑1 (MQ=255) gccgcTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAg > 5:331923/3‑94 (MQ=255) ccggtCGCCAGCTGGCGAGCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGaa < 1:135517/121‑1 (MQ=255) ccggtCGCCAGCTGGCGAGCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGaa > 2:135517/5‑125 (MQ=255) tCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGa > 8:78714/1‑135 (MQ=255) tCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGa < 7:78714/135‑1 (MQ=255) tCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTcg > 1:309115/1‑149 (MQ=255) tCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTcg > 1:240463/1‑149 (MQ=255) tCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGGTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGACGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTct > 7:10748/1‑148 (MQ=255) gCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATcc > 5:154318/1‑139 (MQ=255) gCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATcc < 6:154318/139‑1 (MQ=255) gCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTcgcc > 8:292062/1‑149 (MQ=255) gCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTcgcc > 2:210509/1‑149 (MQ=255) cTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCa < 6:355396/103‑1 (MQ=255) cTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCa > 5:355396/1‑103 (MQ=255) cGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAg < 1:47693/95‑1 (MQ=255) cGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAg > 2:47693/1‑95 (MQ=255) cGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTCGCCGCGTTc > 1:57972/1‑146 (MQ=255) cGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTCGCCGCGTTCGa < 2:57972/148‑1 (MQ=255) | CGCCTGCCCATTAATGGGCTGCACGCCCACCGCAATTGCTACTGAGGAAGACCATGGCCCGCGTAACTGTTGAAGACTGCCTGGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCGACCAAGCGCGCTCGCCAGCTGGCGACCGGCGGCAAAGAGCCACGCGTTGCGTGGGAAAACGACAAGCCAACCGTTGTTGCCCTGCGTGAAATTGCCGAAGGCATCGTCACCAACGAGTTCATCGCCGCTGAAGAGATCGTCACCGAGGATCCGGTGTTCGCCGCGTTCGA > NC_002947/6048763‑6049054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |