| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 546,008 | A→T | 10.4% | intergenic (+48/‑25) | rpoC → / → PP_mr08 | DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 546,008 | 0 | A | T | 10.4% | 188.2 / 11.2 | 67 | intergenic (+48/‑25) | rpoC/PP_mr08 | DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA |
| Reads supporting (aligned to +/- strand): ref base A (32/28); new base T (2/5); total (34/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-01 | |||||||||||
CGAGCGCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGA > NC_002947/545861‑546152 | cgagcgCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGaa < 3:176853/149‑1 (MQ=255) gcgcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATg > 5:346464/1‑149 (MQ=255) aaGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGc > 4:11001/1‑149 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCCCTCCCCGCCCGATCATCGGCAACATTTCATGT‑CGCCg < 8:90213/149‑1 (MQ=25) cGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCAACATTTCATGT‑CGCCga < 3:345548/149‑1 (MQ=255) gctgtggtgCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCgatga < 1:350212/145‑1 (MQ=255) ccGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCAACATTTCATGT‑CGCCGATGATc < 3:131101/149‑1 (MQ=39) cGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATcgggcggg > 3:327678/1‑147 (MQ=255) gACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATcgggcgag > 1:48785/1‑145 (MQ=255) gACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCACGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAg < 3:185647/149‑1 (MQ=255) gACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAg > 1:150542/1‑149 (MQ=255) gACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAg > 4:185647/1‑149 (MQ=255) aCAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAgg < 7:46815/149‑1 (MQ=255) aCCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCg > 2:355497/1‑149 (MQ=255) cTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGc < 6:275250/149‑1 (MQ=255) aaGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCt < 3:11001/148‑1 (MQ=255) aGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCggg > 4:276286/1‑138 (MQ=255) aGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCggg < 3:276286/138‑1 (MQ=255) gcgcCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGa < 2:150542/149‑1 (MQ=255) gcCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACt < 1:355497/149‑1 (MQ=255) gcCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTAGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACt > 8:138378/1‑149 (MQ=255) aGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTggg < 7:45373/149‑1 (MQ=255) aGTGAAGA‑GGACGCTGCACTGCCCCAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGCCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTggg < 8:148042/149‑1 (MQ=255) gTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGTTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCTATCATCGGCGACATTAAATGT‑TGCCGATGATCGGGCGAGGAGGGCCGGGGCCTCGTCTTGACTGGGt < 2:48785/149‑1 (MQ=255) tGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGa < 8:236109/122‑1 (MQ=255) tGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGa > 7:236109/1‑122 (MQ=255) aaGT‑GGAAGCTGCACAGACCGAAGCTCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCTGGGCCTCGTCTTGACTGGGTGc < 5:331012/148‑1 (MQ=255) gT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGc > 1:122898/1‑146 (MQ=255) gAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATcg < 8:42796/107‑1 (MQ=255) gAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATcg > 7:42796/1‑107 (MQ=255) gAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc > 3:216550/1‑149 (MQ=255) gAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCAACATTTCATGT‑CGCCGATGATc > 2:4008/1‑106 (MQ=37) gAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCAACATTTCATGT‑CGCCGATGATc < 1:4008/106‑1 (MQ=37) gCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCctc < 4:327678/149‑1 (MQ=255) cTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGc < 8:60276/94‑1 (MQ=255) cTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGc > 7:60276/1‑94 (MQ=255) gCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCtt > 4:190178/1‑148 (MQ=255) cTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCTACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGa < 2:122898/149‑1 (MQ=255) cGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACtttt > 8:79682/1‑149 (MQ=255) cGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACtttt > 5:18230/1‑149 (MQ=255) gcTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTAccc < 8:67694/149‑1 (MQ=255) tGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAATCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCt > 5:255126/1‑148 (MQ=255) aGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTgg > 4:28007/1‑149 (MQ=255) aGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTgg > 7:333119/1‑149 (MQ=255) gCGGTAATTAAGTACAGGGCAAGGTCCCGGCATGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGt < 6:255126/149‑1 (MQ=255) gTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAg > 3:90309/1‑149 (MQ=255) tAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAgg < 4:91662/149‑1 (MQ=255) tACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCtgcccgt > 1:183526/1‑143 (MQ=255) tACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGtct > 8:184495/1‑149 (MQ=255) aGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACtttt < 4:195801/117‑1 (MQ=255) aGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACtttt > 3:195801/1‑117 (MQ=255) ggCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGcc > 2:282901/1‑148 (MQ=255) gCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAAttttt < 4:216550/149‑1 (MQ=255) cccGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTgg > 7:179591/1‑149 (MQ=255) ccGGCAAGCCTCGGGCGATCATCGGCGACATGAATTGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGc > 4:147957/1‑149 (MQ=255) cGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGtc < 2:128438/133‑1 (MQ=255) cGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCt > 3:304216/1‑149 (MQ=255) gCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTg < 8:333119/149‑1 (MQ=255) gCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGATCCGTCTCGCCAATTTTTGGCTTTCtt > 5:360600/1‑148 (MQ=255) gcGGGCGATCACCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCaa < 4:36855/148‑1 (MQ=255) gggCGATCATCGGCGACATGAAATGTGTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGc > 1:4622/1‑146 (MQ=255) atcatcGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACaa > 4:141419/1‑147 (MQ=255) catcGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAAttttt < 3:134499/127‑1 (MQ=255) catcGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAAttttt > 4:134499/1‑127 (MQ=255) tcGGCAACATTTCATGT‑CGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGtctc > 5:235001/1‑115 (MQ=39) tcGGCAACATTTCATGT‑CGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGtctc < 6:235001/115‑1 (MQ=39) gCGACATTAAAGAT‑TGCCGATGATAGGGCGGGGAGGGCCGCGGCCTCGTCTTGACTGCCGGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTCCAGCGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCATGACATTAGAGTCGc < 4:191900/149‑1 (MQ=255) cATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGa < 3:190178/149‑1 (MQ=255) | CGAGCGCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGT‑GGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGT‑TGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGA > NC_002947/545861‑546152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |