| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 743,448 | G→T | 6.7% | intergenic (+127/+147) | PP_0635 → / ← PP_0636 | group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 743,448 | 0 | G | T | 6.7% | 210.8 / 3.1 | 68 | intergenic (+127/+147) | PP_0635/PP_0636 | group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (31/32); new base T (2/3); total (33/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCT > NC_002947/743300‑743593 | ccGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCg > 6:47063/1‑149 (MQ=255) cGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGt > 8:27639/1‑149 (MQ=255) gCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTa > 4:80594/1‑149 (MQ=255) aGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACa < 5:282773/147‑1 (MQ=255) gCCGCGTAACCTGAACCGCCGTGTACGGAACCGCACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCGAAGGTTGCTTCACATa < 1:47865/148‑1 (MQ=18) tAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGAGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGTCCGCTATGTAACGCAACCGAAGGTTGCTTCACATAGCGGgca < 6:293340/149‑1 (MQ=18) cTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCTT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGacaca > 7:286472/1‑147 (MQ=255) cTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGacaca > 7:314962/1‑147 (MQ=255) gAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGc > 8:8175/1‑149 (MQ=255) aaCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGTGGACGGCGGGTGTGAATCCCACCCCCTCCCCCCCCTCTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGa < 1:296334/149‑1 (MQ=18) aaCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGcg > 1:307493/1‑149 (MQ=255) gccgTGTACGTTAACGTACGGACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTAGATTTCGCGAAATCAGAGGTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGcgtcgt < 6:218801/149‑1 (MQ=37) gccgTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGcgtcgt < 7:27639/149‑1 (MQ=255) gccgTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGcgtcgt < 7:8175/149‑1 (MQ=255) tctttACGGAACCTTACGCACTGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTTCGCGAAATCAGACCTGCCT‑TGTGTGCCCGGTATTTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGcgtcgt < 1:165140/143‑1 (MQ=37) tACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTg > 7:18598/1‑149 (MQ=255) tACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACAATCGGGTGCGTTACATAGCGGACCCACAGCGTCGTGAcatc > 2:165140/1‑146 (MQ=37) cGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGaca < 2:76739/130‑1 (MQ=255) cGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGaca > 1:76739/1‑130 (MQ=255) ggAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGcgtcgt < 8:322465/140‑1 (MQ=255) ggAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGcgtcgt > 7:322465/1‑140 (MQ=255) ggAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCg < 4:276004/149‑1 (MQ=255) aaCCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCggg < 1:40462/149‑1 (MQ=255) tggtgTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTc > 1:141848/1‑149 (MQ=255) tggtgTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTc < 8:213620/149‑1 (MQ=255) gtgtGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTcgc > 7:320859/1‑149 (MQ=255) tgtgAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTcgcg < 8:234260/149‑1 (MQ=255) gtgAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGTCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCgcgg > 4:247485/1‑149 (MQ=255) ggcggGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAg > 3:270018/1‑148 (MQ=255) gcggGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCa < 3:59962/149‑1 (MQ=255) tgtgAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCTT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGAc < 8:286472/149‑1 (MQ=255) aaT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTg > 4:233358/1‑147 (MQ=255) aaT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTg > 2:116965/1‑147 (MQ=255) aT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGAAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAg < 8:314962/149‑1 (MQ=255) cGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAgggg < 8:18598/149‑1 (MQ=255) cGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAggg < 3:233358/148‑1 (MQ=255) cGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAggg < 1:116965/148‑1 (MQ=255) gCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCTGTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAggg > 1:235473/1‑148 (MQ=255) cTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGa < 5:47063/148‑1 (MQ=255) tCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGa > 7:265411/1‑147 (MQ=255) gATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGt > 3:318417/1‑149 (MQ=255) aTTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTg > 5:82703/1‑130 (MQ=255) aTTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTg < 6:82703/130‑1 (MQ=255) gcgcGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGc < 1:55198/148‑1 (MQ=255) gcgAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAgg < 8:46635/129‑1 (MQ=255) gcgAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAgg > 7:46635/1‑129 (MQ=255) gcgAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGt > 6:100675/1‑149 (MQ=255) cgAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGtt > 2:294938/1‑149 (MQ=255) gAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAgaga < 6:268568/120‑1 (MQ=255) gAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAgaga > 5:268568/1‑120 (MQ=255) aTCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTc > 6:340409/1‑147 (MQ=255) aTCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCaa < 7:114179/149‑1 (MQ=255) aGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAagc > 5:149085/1‑148 (MQ=255) cT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGc < 5:340409/149‑1 (MQ=255) gtgCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCa > 6:181649/1‑149 (MQ=255) tgtccGCTATGTAACGCAACCGAAGGTTGCTTCACATAGCGGGCACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCAc > 4:291634/4‑149 (MQ=37) tgCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCa < 2:235473/148‑1 (MQ=255) ccGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACtt < 6:309775/74‑1 (MQ=255) ccGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACtt > 5:309775/1‑74 (MQ=255) ccGCTATGTAACGCAACCGAAGGTTGCTTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGc < 1:271566/140‑1 (MQ=38) ccGCTATGTAACGCAACCGAAGGTTGCTTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGAAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGc > 2:271566/1‑140 (MQ=38) gtgAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCg > 2:52097/1‑148 (MQ=255) gtgAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCg < 1:52097/148‑1 (MQ=255) tgAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGa < 6:149085/148‑1 (MQ=255) aCCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGa > 4:138101/1‑141 (MQ=255) aCCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGa < 3:138101/141‑1 (MQ=255) aCCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAgg > 4:276834/1‑147 (MQ=255) aCCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAgg < 3:276834/147‑1 (MQ=255) gCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCt < 8:320859/148‑1 (MQ=255) | CCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAAT‑‑‑‑CCGCCT‑‑‑‑‑CCTACTCGATTGCGCGAAATCAGACCTGCCT‑TGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCT > NC_002947/743300‑743593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |