Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 949,316 T→A 5.8% F53Y (TTC→TAC)  dsbB → disulfide bond formation protein B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947949,3160TA 5.8% 208.8 / 2.9 69F53Y (TTC→TAC) dsbBdisulfide bond formation protein B
Reads supporting (aligned to +/- strand):  ref base T (32/33);  new base A (2/2);  total (34/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.69e-01

AAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAACCCCATGGTCAGTT  >  NC_002947/949169‑949462
                                                                                                                                                   |                                                                                                                                                  
aaacaTCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGtt                                                                                                                                                    >  4:76516/1‑148 (MQ=255)
  acaTCGCGCCTGATTCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCAt                                                                                                                                                 >  7:274804/1‑149 (MQ=255)
                    gtaCGGCGCTTTCTGGTGGTGCTGGGGCTGATCTGGCTTTCTCTGATCGGCGGCGCGCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATGCTGGAGCGTTTTGCGTTGCTGTTCATTGCCGTGTTTGCCTTCAt                                                                                                                               <  7:268569/147‑1 (MQ=255)
                      aCGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCg                                                                                                                             <  7:318203/149‑1 (MQ=255)
                             tttCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTgcggc                                                                                                                      >  8:115077/1‑149 (MQ=255)
                                  ggTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGc                                                                                                                 >  6:147753/1‑149 (MQ=255)
                                     gctgctGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCAt                                                                                                                               >  8:222899/1‑132 (MQ=255)
                                     gctgctGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCAt                                                                                                                               <  7:222899/132‑1 (MQ=255)
                                        gctgGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGgc                                                                                                           >  3:44264/1‑149 (MQ=255)
                                            gggCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGcgccg                                                                                                       >  2:83264/1‑149 (MQ=255)
                                             ggCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGcgccg                                                                                                       >  4:108438/1‑148 (MQ=255)
                                               cTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAg                                                                                                    >  3:64787/1‑149 (MQ=255)
                                                  aTCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGAt                                                                                                                   >  4:230082/1‑131 (MQ=255)
                                                  aTCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGAt                                                                                                                   <  3:230082/131‑1 (MQ=255)
                                                  aTCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGc                                                                                                   <  8:40614/147‑1 (MQ=255)
                                                    cTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTgcgg                                                                                                                       <  2:27013/125‑1 (MQ=255)
                                                       ccTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGAc                                                                                              <  6:95675/147‑1 (MQ=255)
                                                         tttCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACcttc                                                                                          >  3:231418/1‑149 (MQ=255)
                                                           tCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACcttc                                                                                          <  1:83264/147‑1 (MQ=255)
                                                            cACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACcttctt                                                                                        <  5:147753/148‑1 (MQ=255)
                                                            cACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGATGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCttcttc                                                                                       >  8:73294/1‑149 (MQ=255)
                                                             aCTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGAt                                                                                                                   <  4:196181/120‑1 (MQ=255)
                                                             aCTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCttcttc                                                                                       >  5:322643/1‑148 (MQ=255)
                                                             aCTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCttcttc                                                                                       <  6:231030/148‑1 (MQ=255)
                                                             aCTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCttcttc                                                                                       >  5:231030/1‑148 (MQ=255)
                                                              cTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGa                                                                                     <  8:232528/149‑1 (MQ=255)
                                                               tGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGcgcc                                                                                                        >  3:271202/1‑129 (MQ=255)
                                                               tGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGcgcc                                                                                                        <  4:271202/129‑1 (MQ=255)
                                                               tGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAg                                                                                    >  5:54278/1‑149 (MQ=255)
                                                                 aTCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTACATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGa                                                                                     <  8:185560/146‑1 (MQ=255)
                                                                 aTCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTACATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGa                                                                                     >  7:185560/1‑146 (MQ=255)
                                                                 aTCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTACATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGa                                                                                     >  7:180435/1‑146 (MQ=255)
                                                                 aTCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTACATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGa                                                                                     <  8:180435/146‑1 (MQ=255)
                                                                   cggcggCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGt                                                                                >  6:160475/1‑149 (MQ=255)
                                                                      cggcgCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTtgg                                                                             <  3:316410/149‑1 (MQ=255)
                                                                        gcgcCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTtggtg                                                                           <  3:76516/149‑1 (MQ=255)
                                                                             ctctACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCt                                                                      >  4:42498/1‑149 (MQ=255)
                                                                             ctctACATGAAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTCCCTTCAACGCTGCGGCGATGTCCGGGCGCCGCAGCCTGACCTTCTTCGATGAGTTGGTGGTGCt                                                                      >  7:136811/1‑149 (MQ=255)
                                                                                   aTGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGc                                                                >  3:181957/1‑149 (MQ=255)
                                                                                     gCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCg                                                                                                                             <  3:248983/86‑1 (MQ=255)
                                                                                     gCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCg                                                                                                                             >  4:248983/1‑86 (MQ=255)
                                                                                      cAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCa                                                              <  4:231418/148‑1 (MQ=255)
                                                                                      cAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCAt                                                             >  5:217522/1‑149 (MQ=255)
                                                                                       aGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCAtt                                                            >  4:345763/1‑149 (MQ=255)
                                                                                          tggtgCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGc                                                         <  3:42498/149‑1 (MQ=255)
                                                                                            gtgCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCg                                                        <  1:50701/148‑1 (MQ=255)
                                                                                            gtgCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCg                                                        <  5:160475/148‑1 (MQ=255)
                                                                                             tgCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCgg                                                       >  2:229661/1‑148 (MQ=255)
                                                                                               cTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAAt                                                    >  4:331196/1‑149 (MQ=255)
                                                                                                  ggCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATc                                                   <  6:217522/147‑1 (MQ=255)
                                                                                                          aCCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGCCCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGcggcgg                                         >  8:19536/1‑149 (MQ=255)
                                                                                                            ccTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCACCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCg                                                        >  6:180911/1‑132 (MQ=255)
                                                                                                            ccTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCACCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCg                                                        <  5:180911/132‑1 (MQ=255)
                                                                                                                  cgctcggCATCCTGCAGCGTGTTCCGATCCTGTTGATGGCCGGCTGTGCCGTCCTCGCTGCGTCGCAGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGCTGGTGGTGCTCAGTGCCATTGGCGGACTCGTTGCGGCGGGCAACCAt                                 <  8:69875/143‑1 (MQ=255)
                                                                                                                  cGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCAt                                 >  5:255429/1‑149 (MQ=255)
                                                                                                                  cGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCAt                                 <  6:322643/149‑1 (MQ=255)
                                                                                                                  cGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGCTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCAt                                 <  6:54278/149‑1 (MQ=255)
                                                                                                                        gCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGcggcgg                                         >  8:171106/1‑135 (MQ=255)
                                                                                                                        gCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGcggcgg                                         <  7:171106/135‑1 (MQ=255)
                                                                                                                          aTCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGAAGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATctg                                                 >  2:149239/1‑123 (MQ=255)
                                                                                                                            ccTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGAGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATAc                       >  5:268607/1‑149 (MQ=255)
                                                                                                                             cttcAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATAc                       <  6:253993/145‑1 (MQ=255)
                                                                                                                                ctgCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGc                   <  1:127292/147‑1 (MQ=255)
                                                                                                                                cAGCGTTATGCGTTGCTGTTCATTGCCGTTTTTGCCTTCATCGCTGCGGCGATGTCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGTTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGc                   <  8:136811/149‑1 (MQ=255)
                                                                                                                                cAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTc                     <  4:44264/147‑1 (MQ=255)
                                                                                                                                     ttATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAAcc              <  4:64787/149‑1 (MQ=255)
                                                                                                                                     ttATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAAcc              >  4:106792/1‑149 (MQ=255)
                                                                                                                                      tATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAAccc             >  3:168833/1‑149 (MQ=255)
                                                                                                                                          cGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAACCCCATg         <  4:181957/149‑1 (MQ=255)
                                                                                                                                            ttGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAACCCCATGGt       <  6:255429/149‑1 (MQ=255)
                                                                                                                                                  ttCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAACCCCATGGTCAGtt  <  6:268607/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
AAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAACCCCATGGTCAGTT  >  NC_002947/949169‑949462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: