| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,400,874 | A→T | 5.5% | intergenic (+37/‑132) | ybgF → / → queE | TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,400,874 | 0 | A | T | 5.5% | 276.1 / 4.6 | 91 | intergenic (+37/‑132) | ybgF/queE | TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase |
| Reads supporting (aligned to +/- strand): ref base A (40/46); new base T (3/2); total (43/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.50e-01 | |||||||||||
TATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACATT > NC_002947/1400732‑1401019 | tATGGGCCATTCCGACAAGGGAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCATCTGGCCCTGCGTGACCTGCTGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGATA‑GAAACCCGCGCCAGTcgcg < 8:161144/149‑1 (MQ=255) tGGGCCATACCGCCAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACGCAGTACCCCGGCACCTCTTCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCgg < 8:99638/148‑1 (MQ=255) gCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGttt > 4:271132/1‑149 (MQ=255) cATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGttttt < 8:320868/149‑1 (MQ=255) aTACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGAACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGtttttt > 2:253544/1‑149 (MQ=255) tACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGtttttt > 4:174918/1‑148 (MQ=255) tACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGtttttt < 3:174918/148‑1 (MQ=255) tACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTc < 4:4299/149‑1 (MQ=255) tACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTc > 4:110124/1‑149 (MQ=255) cGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGtt < 3:349154/149‑1 (MQ=255) gACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTc > 1:7731/1‑133 (MQ=255) gACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTc < 2:7731/133‑1 (MQ=255) aaGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGaa < 1:53619/149‑1 (MQ=255) ggTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATc < 4:316678/149‑1 (MQ=255) gTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCa < 5:151955/149‑1 (MQ=255) gTAAAAGGCAGCCTTCCGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCGGTACCGCTCGAAA‑GAACCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCa < 5:146376/149‑1 (MQ=255) tAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCAc > 3:31085/1‑149 (MQ=255) aGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGcc < 4:31085/149‑1 (MQ=255) ccTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCttttt > 5:347855/1‑149 (MQ=255) ccTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCttttt > 3:146603/1‑149 (MQ=255) cTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCttttt < 3:247477/148‑1 (MQ=255) cagcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAATCAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTc < 1:270044/148‑1 (MQ=255) cagcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTc < 6:347855/147‑1 (MQ=255) cagcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTc < 7:3062/147‑1 (MQ=255) cagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTaaa < 4:223171/149‑1 (MQ=255) gTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAacac > 3:216911/1‑149 (MQ=255) ctGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACgc < 4:327578/147‑1 (MQ=255) gACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACgctgc > 1:361022/1‑149 (MQ=255) cccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGctgctg > 3:105081/1‑149 (MQ=255) aGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCgg < 2:361022/149‑1 (MQ=255) cccGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTa > 8:51652/1‑107 (MQ=255) cccGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTa < 7:51652/107‑1 (MQ=255) ccGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAAc > 6:104103/1‑148 (MQ=255) cACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTAt < 5:284873/149‑1 (MQ=255) cACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTAt < 4:146603/149‑1 (MQ=255) aCCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGACTGGCGCGGGtttc < 7:322742/94‑2 (MQ=39) aCCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGACTGGCGCGGGtttc > 8:322742/1‑93 (MQ=39) ccTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGTTCGAAA‑‑AAACCCGCGACTGGCGCGGGtttctttc < 1:229455/96‑3 (MQ=25) ccTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑‑AAACCCGCGACTGGCGCGGGtttctttc > 2:229455/1‑94 (MQ=37) ctctGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTCAGCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCATTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGt > 1:89105/1‑149 (MQ=255) ctctGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTAt < 7:57379/146‑1 (MQ=255) ctctGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTAt > 8:57379/1‑146 (MQ=255) ctctGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTc > 5:266100/1‑149 (MQ=255) tctGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTc > 4:86435/1‑148 (MQ=255) tctGCCACTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGATGCTCCGGATAACGCTATGTc > 7:276963/1‑148 (MQ=255) ccGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGa < 3:110124/146‑1 (MQ=255) cGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTcc < 1:316763/149‑1 (MQ=255) gCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGc < 3:271132/149‑1 (MQ=255) ccAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTc < 5:171273/100‑1 (MQ=255) ccAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTc > 6:171273/1‑100 (MQ=255) cAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCt > 5:160396/1‑148 (MQ=255) cGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACg < 6:266100/149‑1 (MQ=255) gTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACgg < 5:104103/149‑1 (MQ=255) tGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACg > 8:325987/1‑147 (MQ=255) aCCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCAAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAg < 4:105081/148‑1 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACa < 4:213130/133‑1 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACa > 3:213130/1‑133 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCg > 8:6356/1‑149 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCAATGCCCTTTTTTCGTAAAAACGCTGCTGCCGAAAACGCTATGTAGAGTCCGCGACAGTGCCTGACGGAGGCg > 1:357582/1‑149 (MQ=255) gCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCGCTTTTTTCGTAAACACGCTGCTGCGGATTACGCTATGTCGAGTCAGCGACAGTGGGTGACGGAGGCggg > 4:4876/1‑148 (MQ=255) gCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGa > 1:215023/1‑149 (MQ=255) ctAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCAGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGAGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGtt > 6:83569/1‑149 (MQ=255) ggCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTa < 4:216911/148‑1 (MQ=255) ggCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAg < 2:71319/149‑1 (MQ=255) ggCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAg < 6:160396/149‑1 (MQ=255) ggCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCATTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAg < 2:89105/149‑1 (MQ=255) ggCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTAGTTAGAATCACTGCCCTTTTTTCGTAAGCACGCTGCTGCGGATAACGCTAGGTCGAGTCCGCGACAGTGCCTGACGGAGTCGGACAGCCTCTATAg > 6:63479/1‑149 (MQ=255) cGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCt < 2:215023/149‑1 (MQ=255) tGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTACCTGTc < 7:325987/149‑1 (MQ=255) gCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGt > 2:298384/1‑69 (MQ=255) gCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGt < 1:298384/69‑1 (MQ=255) gCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGa < 1:131631/108‑1 (MQ=255) gCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGa > 2:131631/1‑108 (MQ=255) cTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTc > 4:57848/1‑97 (MQ=255) cTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTc < 3:57848/97‑1 (MQ=255) aCCGCTAGATA‑GAAACACGCGCCAGTCGCGGGTTTTTTCGTTAGAATGACTGCCCTTTTTTCTTAATCACGCTGCTGCGGTTAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACTGCCTGTTTAGCTGTCACGCACGTg > 6:140130/1‑149 (MQ=255) ccGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTgg > 3:186826/1‑149 (MQ=255) cGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGc < 4:186826/149‑1 (MQ=255) gaaa‑gaaaCCCGCGCCAGTCGCGTGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGATGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCa < 6:106939/149‑1 (MQ=255) gaaa‑gaaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGc < 3:4876/148‑1 (MQ=255) gaaa‑gaaaCCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCAGTGGCGAGCa > 8:240841/1‑149 (MQ=255) aCCCGCGACTGGCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGa > 7:32833/1‑149 (MQ=255) ccGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTg < 5:229893/114‑1 (MQ=255) ccGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTg > 6:229893/1‑114 (MQ=255) ccGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGaca > 6:9489/1‑149 (MQ=255) ccGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTGTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGaca > 5:251804/1‑149 (MQ=255) gcgcCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 5:54282/143‑1 (MQ=255) gcgcCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa > 6:54282/1‑143 (MQ=255) gcgcCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGAcaca > 5:79822/1‑149 (MQ=255) cgcCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACAt > 5:115358/1‑149 (MQ=255) cccAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGTATAACGCTATGTCGAGTCCGCTACAGTGCCTGACGGAGGCCGACAGCCTTTTTACCTGTCACGCCCGTGGCGAGCATGCAAGACACAtt < 5:140130/148‑1 (MQ=255) | TATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTGTC‑GCTGTACCGCTCGAAA‑GAAACCCGCGCCAGTCGCGGGTTTTTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACATT > NC_002947/1400732‑1401019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |