| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,596,373 | A→T | 7.3% | L213Q (CTG→CAG) | dctD‑III ← | C4‑dicarboxylate transport transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,596,373 | 0 | A | T | 7.3% | 199.4 / 3.6 | 67 | L213Q (CTG→CAG) | dctD‑III | C4‑dicarboxylate transport transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (28/34); new base T (2/3); total (30/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTC > NC_002947/1596231‑1596513 | tATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCg < 8:135589/148‑1 (MQ=255)tATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTAATGGCCGAACAGTTCgg > 6:306004/1‑149 (MQ=255) tCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACTGTTCGGc > 2:176989/1‑148 (MQ=255) aCCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACTGTTCGGccat < 1:176989/149‑3 (MQ=255) aCCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACTGTTCGGccat < 2:293468/149‑3 (MQ=255) cccGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCg < 5:294025/149‑1 (MQ=255) ccGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCg > 3:198506/1‑148 (MQ=255) aCAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAATGCGCC‑G‑CTCTCATGGCCGAACTGTTCGGccat < 5:58932/142‑3 (MQ=255) aCAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGACACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACTGTTCGGccat > 6:58932/1‑140 (MQ=255) gCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGAc > 7:209955/1‑149 (MQ=255) cTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACt > 6:174912/1‑149 (MQ=255) ttGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTc > 4:183350/1‑149 (MQ=255) ccTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCgggg < 1:290297/149‑1 (MQ=255) cTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGa < 3:90912/149‑1 (MQ=255) gCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCcgc > 5:260407/1‑149 (MQ=255) ccAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATAATCCAGATTGCGGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTAGGGCGTCGAACAGCGACACGGGGATGGCcgcg > 7:338188/1‑149 (MQ=38) gggCCTGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGt < 8:144115/149‑1 (MQ=255) gCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGtt > 8:322314/1‑148 (MQ=255) cATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTaa < 6:260407/149‑1 (MQ=255) tGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAgg > 1:201359/1‑149 (MQ=255) ctctCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑GCCACTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAgg < 1:103005/148‑1 (MQ=255) ctctCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGc > 1:175057/1‑149 (MQ=255) tctcGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGc > 7:30455/1‑148 (MQ=255) ctcGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTa > 8:57441/1‑149 (MQ=255) tcGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCt < 5:306004/147‑1 (MQ=255) gtcgAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCt > 5:228198/1‑149 (MQ=255) tcgAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCtt < 3:146026/149‑1 (MQ=255) gatgAACTCGGTGGCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTgg < 8:338188/146‑1 (MQ=255) ggAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTggcg > 6:329114/1‑149 (MQ=255) gAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCgggg > 6:220532/1‑112 (MQ=255) gAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCgggg < 5:220532/112‑1 (MQ=255) aaCACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTggcggc < 3:183350/149‑1 (MQ=255) aCCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCg > 7:95773/1‑148 (MQ=255) aCCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCg > 5:230495/1‑148 (MQ=255) ccGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa < 7:57441/149‑1 (MQ=255) ccGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGaa < 7:322314/149‑1 (MQ=255) gCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTg < 2:64852/149‑1 (MQ=255) cATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgc < 5:174912/149‑1 (MQ=255) cATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTg > 6:140690/1‑148 (MQ=255) cATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCGCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgc < 2:69968/149‑1 (MQ=255) tACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACTAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgcag < 2:201359/149‑1 (MQ=255) tACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgcag < 5:329114/149‑1 (MQ=255) tCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGcc > 1:313468/1‑134 (MQ=255) tCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGcc < 2:313468/134‑1 (MQ=255) tCCAGCTTGCCGATGCGTTTACACTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAAAAGTTAGTCCTCGAACATCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGTCACGGTGGCCGAAGTCGTgcagg > 3:343172/1‑147 (MQ=255) ccGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCAc < 8:209955/149‑1 (MQ=255) gATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCAccc < 3:20299/149‑1 (MQ=255) gTTTACCCTGGGCGCCCGTGAAGGCGCCGG‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTc > 1:209224/1‑149 (MQ=255) ttACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCtt > 7:196744/1‑149 (MQ=255) cccTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGc < 8:95773/148‑1 (MQ=255) cccTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGc > 1:159519/1‑148 (MQ=255) cccTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGc < 2:175057/148‑1 (MQ=255) cccTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGc < 2:159519/148‑1 (MQ=255) tGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACt > 7:61413/1‑149 (MQ=255) gcgcCAGTGAATGCGCC‑G‑CTCTCATGGCAGAACAGTTCGGCCTCGAACAGCGACTCGGTGATGGCCTCG‑CAGTTAAGGGCTACAAAGGTCTTGGCGGCACGGGTGCCGAAGTCGTGCAGGCAGCGGGACACCCGCTCCTTGCCACTGcc < 4:343172/149‑1 (MQ=255) ccGTGAAGGCGCC‑G‑CTCTCATGGCCGATCAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCa < 4:348917/140‑1 (MQ=255) ccGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCa > 3:348917/1‑140 (MQ=255) gTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGt < 1:255544/110‑1 (MQ=255) gTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGt > 2:255544/1‑109 (MQ=255) ggAAGGCGCC‑G‑CTCTCATGGCCGAACAGTGCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCa < 8:231919/148‑1 (MQ=255) gAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGt > 7:174877/1‑144 (MQ=255) gAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGt < 8:174877/144‑1 (MQ=255) gcgcC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACcgcg < 5:332349/149‑1 (MQ=255) c‑g‑cTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATc < 6:230495/149‑1 (MQ=255) ctctCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCaa < 8:209360/149‑1 (MQ=255) ctctCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCaa < 2:209224/149‑1 (MQ=255) ggCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTc > 2:158613/1‑149 (MQ=255) | TATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCC‑G‑CTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCG‑CAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTC > NC_002947/1596231‑1596513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |