Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,642,278 C→G 8.5% intergenic (‑106/+46) PP_1442 ← / ← lon‑I hypothetical protein/DNA‑binding ATP‑dependent protease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,642,2780CG 8.5% 174.2 / 7.0 59intergenic (‑106/+46)PP_1442/lon‑Ihypothetical protein/DNA‑binding ATP‑dependent protease
Reads supporting (aligned to +/- strand):  ref base C (23/31);  new base G (2/3);  total (25/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.19e-01

CGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGAAGTCGCCGCGGTTGG  >  NC_002947/1642136‑1642424
                                                                                                                                               |                                                                                                                                                   
cGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTAccc                                                                                                                                               <  5:89550/149‑1 (MQ=255)
     cTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGGGCAAGCCCGCACCTGCACGGGTACGCTACCCCTGCa                                                                                                                                         <  6:138416/149‑1 (MQ=38)
      tCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGCGTAGCGTACCCGTGCAg                                                                                                                                        >  7:338810/1‑149 (MQ=255)
           ggAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCg                                                                                                                                   <  2:228085/149‑1 (MQ=255)
            gAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCgg                                                                                                                                  <  4:338877/149‑1 (MQ=255)
            gAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGCACCGCCCTCTTCGCGGGCAAGCCCGCACCTGCACGGGTACGCTACCCCTGCAGGCGCgg                                                                                                                                  <  1:44570/149‑1 (MQ=18)
              aCGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGCACCGCCCTCTTCGCGGGCAAGCCCGCACCTGCACGGGTACGCTACCCCTGCAGGCGCGGGc                                                                                                                                <  6:113990/149‑1 (MQ=18)
                gAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCtt                                                                                                                              >  8:97546/1‑149 (MQ=255)
                 aGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGATGCCTGTGCCGGTCCTTTCGCGAGTAAGCCAGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTg                                                                                                                             >  7:149891/1‑149 (MQ=255)
                  gCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGc                                                                                                                            >  2:98520/1‑149 (MQ=255)
                    aGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGccc                                                                                                                          >  4:46364/1‑149 (MQ=255)
                               ggTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGc                                                                                                               <  7:268470/149‑1 (MQ=255)
                               ggTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATAACCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGc                                                                                                               <  5:123490/149‑1 (MQ=255)
                                   aTGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGt                                                                                                            <  3:46364/148‑1 (MQ=255)
                                      gtcgCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGCACGAGGAATGTTGTGCTGCCTGTGCCGGTCCTTTCGCGCGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGAGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAg                                                                                                        <  4:241762/146‑1 (MQ=255)
                                       tggCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTATCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAgg                                                                                                       <  5:23334/149‑1 (MQ=255)
                                           tCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGc                                                                                                      >  2:74765/1‑146 (MQ=255)
                                                aGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACa                                                                                               <  1:74765/149‑1 (MQ=255)
                                                aGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAg                                                                                              <  7:97546/149‑1 (MQ=255)
                                                   cTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGTCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCa                                                                                            <  1:98520/149‑1 (MQ=255)
                                                        gATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTACAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCg                                                                                      >  3:303223/1‑149 (MQ=255)
                                                          tGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGcc                                                                                    <  2:66253/149‑1 (MQ=255)
                                                          tGGCCTGAGGAAACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGc                                                                                     >  6:288992/1‑148 (MQ=255)
                                                             ccTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACg                                                                                 >  6:3709/1‑149 (MQ=255)
                                                              cTGAGGATACCCGATGATCGAGGAATTTTGTGCTGCCTGTGCGGGTCCTTTCGCTAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGGACTTTCGCCACGt                                                                                <  8:241592/149‑1 (MQ=255)
                                                                        ccGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAgcg                                                                      >  3:316835/1‑149 (MQ=255)
                                                                           atgatCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCtt                                                                   <  5:337883/149‑1 (MQ=255)
                                                                             gatCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTg                                                                  <  4:2553/148‑1 (MQ=255)
                                                                               tCGAGGATATTTGTGATTCCTGTGCGGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGc                                                                <  8:149891/148‑1 (MQ=255)
                                                                                cGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCg                                                               >  7:129385/1‑148 (MQ=255)
                                                                                cGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCg                                                               >  1:57970/1‑148 (MQ=255)
                                                                                 gAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGc                                                                <  4:278310/146‑1 (MQ=255)
                                                                                 gAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGc                                                                >  3:278310/1‑146 (MQ=255)
                                                                                 gAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGa                                                              >  2:335448/1‑148 (MQ=255)
                                                                                 gAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTACAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTg                                                                                                           >  7:68449/1‑103 (MQ=255)
                                                                                 gAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTACAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTg                                                                                                           <  8:68449/103‑1 (MQ=255)
                                                                                   ggAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAAt                                                           <  2:57970/149‑1 (MQ=255)
                                                                                      aaTTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGc                                                         <  4:316835/148‑1 (MQ=255)
                                                                                            tgctgcCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTTCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTc                                                   <  4:303223/148‑1 (MQ=255)
                                                                                             gctgcCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTg                                                                                                           >  2:256589/1‑91 (MQ=255)
                                                                                             gctgcCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGCTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTg                                                                                                           <  1:256589/91‑1 (MQ=255)
                                                                                               tgcCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGc                                               >  6:356997/1‑149 (MQ=255)
                                                                                                  cTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGGAAAGCCCGTGGGGAAATGCACTGTCAGGCCtt                                            >  2:258293/1‑149 (MQ=255)
                                                                                                                    gAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTa                                  <  5:217988/141‑1 (MQ=255)
                                                                                                                    gAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTa                                  >  6:217988/1‑141 (MQ=255)
                                                                                                                         aGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGttct                     <  5:3709/149‑1 (MQ=255)
                                                                                                                          gCCCGCGCCTGCAGGGGTAGCGTACCCGTGTAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGttctt                    >  1:215627/1‑149 (MQ=255)
                                                                                                                          gCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGttctt                    >  5:57748/1‑149 (MQ=255)
                                                                                                                          gCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGttctt                    <  1:258293/149‑1 (MQ=255)
                                                                                                                           cccGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGttcttc                   <  3:195325/149‑1 (MQ=255)
                                                                                                                            ccGCACCTGCACGGGTACGCTACCCCTGCAGGCGCGGGCTTACTCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGttcttc                   >  2:118859/1‑148 (MQ=37)
                                                                                                                              gcgcCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGaa                <  5:356997/149‑1 (MQ=255)
                                                                                                                              gcgcCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGaa                <  1:335448/149‑1 (MQ=255)
                                                                                                                                   tGCACGGGTAAGCTACCCCTGCAGGTGCGGGCTTGAGCGCGAAGAGGGCGCTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGAAGTcgc           >  8:44356/1‑149 (MQ=255)
                                                                                                                                        gggTAGCGTATCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTcg                                          <  2:88105/113‑1 (MQ=255)
                                                                                                                                        gggTAGCGTATCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTcg                                          >  1:88105/1‑113 (MQ=255)
                                                                                                                                          gTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTCCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCACGCAGGTAGTCCGGCAGTTCTTCGAAGTCGCCGCGGtt    >  1:254608/1‑149 (MQ=255)
                                                                                                                                           tAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCAGGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGGCTTCGCGCAGGTAGTCCGGCAGTTCTTCGAAGTCGCCGCGGTTg   <  8:129385/149‑1 (MQ=255)
                                                                                                                                             gCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGAAGTCGCCGCGGTTgg  <  6:57748/148‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
CGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCGTACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGAAGTCGCCGCGGTTGG  >  NC_002947/1642136‑1642424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: