| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,691,772 | T→C | 8.1% | intergenic (+39/‑132) | PP_1487 → / → PP_1488 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,691,772 | 0 | T | C | 8.1% | 203.8 / 6.5 | 74 | intergenic (+39/‑132) | PP_1487/PP_1488 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base T (33/35); new base C (2/4); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.23e-01 | |||||||||||
GAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGACCT > NC_002947/1691626‑1691919 | gAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGAt > 6:115261/1‑147 (MQ=255)gAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGAt < 5:115261/147‑1 (MQ=255) aaCTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAgc < 3:340076/149‑1 (MQ=255) cTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAgcgc < 6:63051/149‑1 (MQ=255) aGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTg < 7:209281/149‑1 (MQ=255) cTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGCGCCGCACGGGCGGCGCt > 6:362986/1‑149 (MQ=255) aCCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATc > 4:100411/1‑126 (MQ=255) aCCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATc < 3:100411/126‑1 (MQ=255) ccTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTcc > 1:89501/1‑149 (MQ=255) ccTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCg > 7:340160/1‑149 (MQ=255) cTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGCGCCGCACGGGCGGCGCTcgat < 4:75293/149‑4 (MQ=39) gACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGtct < 6:311424/148‑1 (MQ=255) aCGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCACGGGCGGCGCTCGATCTca < 8:89942/149‑1 (MQ=255) aGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGCGCCGCACGGGCGGCGCTCGATCTCACAg < 5:362986/149‑1 (MQ=38) aGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGCGCCGCACGGGCGGCGCTCGATCTCACAg < 7:21488/149‑1 (MQ=38) gCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGgcgc > 8:116769/1‑148 (MQ=255) ccGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGG‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCATGCGGCGCTCCGTCTCACAGGCGCaa > 1:274069/1‑148 (MQ=255) gCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGtctc > 4:170794/1‑129 (MQ=255) gCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGtctc < 3:170794/129‑1 (MQ=255) tGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACaa > 2:55396/1‑149 (MQ=255) tGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACaa > 8:222112/1‑149 (MQ=255) tGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACaa > 8:319004/1‑149 (MQ=255) ccGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATcaca > 2:329547/1‑149 (MQ=255) ccGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATcaca > 7:206942/1‑149 (MQ=255) ccGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATcaca > 2:123608/1‑149 (MQ=255) ccGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGAGGCGCTCCGACTCACAGGCGCAAAATTCCTGACGACACTcaca > 4:122060/1‑149 (MQ=255) cGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACAt < 1:55396/149‑1 (MQ=255) cGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACAt < 7:319004/149‑1 (MQ=255) cTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATcac > 2:213475/1‑143 (MQ=255) cTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATcac < 1:213475/143‑1 (MQ=255) gcgcCA‑GGAACTGGAAAGCCAGGTGCGGGTTGGCTGCAGCGTAGTGGCGGTGATTGCCACGGCCTATTGAGCGCATGTGAGATCGACCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTcat > 1:198691/1‑127 (MQ=255) gcgcCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCt < 2:198691/128‑1 (MQ=255) gcCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCg > 3:260889/1‑148 (MQ=255) gcCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCg > 2:264824/1‑148 (MQ=255) a‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGt > 8:216240/1‑146 (MQ=255) gAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGAc > 7:211006/1‑149 (MQ=255) gAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGAc < 8:33384/149‑1 (MQ=255) aCTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACct < 8:211006/149‑1 (MQ=255) ggAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGt < 8:190659/139‑1 (MQ=255) ggAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGt > 7:190659/1‑139 (MQ=255) gAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTga < 4:327930/117‑1 (MQ=255) gAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTga > 3:327930/1‑117 (MQ=255) gAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTgg > 3:301074/1‑149 (MQ=255) gAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTgg > 2:92214/1‑149 (MQ=255) gAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTg < 2:89501/148‑1 (MQ=255) aaaGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTggg < 1:92214/149‑1 (MQ=255) aaaGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTggg > 5:6409/1‑149 (MQ=255) aaaGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTggg < 1:329547/149‑1 (MQ=255) aGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGc > 1:344087/1‑148 (MQ=255) ccAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCta > 3:258418/1‑148 (MQ=255) aGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATAc > 7:169722/1‑149 (MQ=255) gTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCAAGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGAGCAAAATTCCTGACGACAATCACATCAAAACCGTAAGACCTCTGGGCTATACtt > 5:238357/1‑149 (MQ=255) ggCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCt > 6:111618/1‑98 (MQ=255) ggCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCt < 5:111618/98‑1 (MQ=255) tGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACATC‑GGCGAttttt > 1:111063/1‑149 (MQ=255) cAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTcc < 8:169722/149‑1 (MQ=255) cAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTcc < 4:258418/149‑1 (MQ=255) cAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGAGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTcc < 6:308241/149‑1 (MQ=255) tAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTc < 8:206942/149‑1 (MQ=255) tGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGtt < 5:287270/149‑1 (MQ=255) ttGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTcc > 3:46007/1‑149 (MQ=255) gCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCt < 2:344087/148‑1 (MQ=255) cgaCGTCCTATTTTGGGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTGTCTCAGGCGCAAATTTCGTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCTCTCGTTGTGAATTCCTGa < 6:238357/147‑1 (MQ=38) ccACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGa < 8:340160/149‑1 (MQ=255) ccACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGa < 7:222112/149‑1 (MQ=255) cGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGAggg < 7:116769/149‑1 (MQ=255) gCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCt < 7:216240/149‑1 (MQ=255) ttGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAAt < 4:46007/148‑1 (MQ=255) taGCGGCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGGTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAAtgt < 5:42312/147‑1 (MQ=255) tgcgcCTGTGAGATGGAGCGCCGCCCGTGCGGGGCTCCTTCTCACAGGCGCAATATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAAtgtg < 2:111063/147‑1 (MQ=255) aGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAAtgtg < 6:6409/148‑1 (MQ=255) cTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACCATCACATCAATACCGTAAGACCTCTGGGCTATACTGC‑GGCGAGTTTGCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAAc > 3:316356/1‑149 (MQ=255) cTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCAGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTgaagaa < 1:264824/149‑1 (MQ=255) cTGTGAGACGGAGCGCCGCACGGGCGGCGCTCGATCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGa > 4:240259/1‑131 (MQ=37) cTGTGAGACGGAGCGCCGCACGGGCGGCGCTCGATCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGa < 3:240259/131‑1 (MQ=37) aTCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGGTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGACCt > 1:213758/1‑149 (MQ=255) | GAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCA‑GGAACTGGAAAGCCAGGTGC‑GGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTC‑GGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGACCT > NC_002947/1691626‑1691919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |