Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,714,464 C→A 6.0% P103Q (CCG→CAG)  PP_1509 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,714,4640CA 6.0% 213.3 / 3.2 67P103Q (CCG→CAG) PP_1509hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (32/31);  new base A (2/2);  total (34/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.95e-01

CGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCAACCAGGCCTTTTTTGCCAAGGGTGA  >  NC_002947/1714321‑1714611
                                                                                                                                               |                                                                                                                                                   
cGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTgg                                                                                                                                                >  2:93527/1‑149 (MQ=255)
cGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTgg                                                                                                                                                <  2:238377/149‑1 (MQ=255)
       ggCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCAGCGGGGccatca                                                                                                                                         <  3:311685/149‑5 (MQ=255)
        gCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGgcgc                                                                                                                                        <  3:296146/149‑1 (MQ=255)
        gCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCAGGGCCggggg                                                                                                                                        >  5:44812/1‑146 (MQ=255)
         cACCATTGCCCGCTGGGTGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGcgcg                                                                                                                                       <  5:133603/149‑1 (MQ=255)
            cATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCGAACTGGGCCGgcaactg                                                                                                                                     >  5:112603/1‑143 (MQ=255)
             aTTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTAt                                                                                                                                    >  5:369537/1‑148 (MQ=255)
                  ccGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCAccc                                                                                                                               >  3:208025/1‑148 (MQ=255)
                                  aTGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCGTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGcc                                                                                                              <  4:199394/149‑1 (MQ=255)
                                    gCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCgg                                                                                                            >  7:3147/1‑149 (MQ=255)
                                     cccGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCgg                                                                                                            <  7:322670/148‑1 (MQ=255)
                                        gAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTgg                                                                                                                         >  8:274656/1‑132 (MQ=255)
                                        gAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTgg                                                                                                                         <  7:274656/132‑1 (MQ=255)
                                        gAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGcc                                                                                                          >  6:252691/1‑147 (MQ=255)
                                        gAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCa                                                                                                        <  5:106627/149‑1 (MQ=255)
                                            aCTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTc                                                                                                    >  1:16254/1‑149 (MQ=255)
                                             cTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAATGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCg                                                                                                             <  2:266857/139‑1 (MQ=255)
                                             cTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCg                                                                                                             >  1:266857/1‑139 (MQ=255)
                                             cTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTAGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCg                                                                                                   >  1:288708/1‑149 (MQ=255)
                                              tttCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCgg                                                                                                  >  4:310902/1‑149 (MQ=255)
                                                  gCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCg                                                                                              >  8:132845/1‑149 (MQ=255)
                                                           ccAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGGGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGttt                                                                                      <  1:93527/148‑1 (MQ=255)
                                                           ccAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGtt                                                                                       <  5:173283/147‑1 (MQ=255)
                                                           ccAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTg                                                                                     >  7:222444/1‑149 (MQ=255)
                                                           ccAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTg                                                                                     <  4:219675/149‑1 (MQ=255)
                                                                     gcgGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTg                                                                                 >  5:109422/1‑143 (MQ=255)
                                                                     gcgGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTg                                                                                 <  6:109422/143‑1 (MQ=255)
                                                                     gcgGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCttt                                                                           >  4:191078/1‑149 (MQ=255)
                                                                       gggATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGt                                                                         <  6:369537/149‑1 (MQ=255)
                                                                              cAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTg                                                                                                                      <  5:363080/97‑1 (MQ=255)
                                                                              cAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTg                                                                                                                      >  6:363080/1‑97 (MQ=255)
                                                                               aGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCg                                                                                                             >  6:333856/1‑105 (MQ=255)
                                                                               aGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCg                                                                                                             <  5:333856/105‑1 (MQ=255)
                                                                               aGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCt                                                                 >  1:113495/1‑149 (MQ=255)
                                                                                gCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTc                                                                >  4:101378/1‑149 (MQ=255)
                                                                                 ccATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCg                                                               <  2:16254/149‑1 (MQ=255)
                                                                                   aTGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCAc                                                                      >  1:198463/1‑140 (MQ=255)
                                                                                   aTGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCAc                                                                      <  2:198463/140‑1 (MQ=255)
                                                                                   aTGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGAt                                                             <  2:288708/149‑1 (MQ=255)
                                                                                    tGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGAt                                                             >  8:214299/1‑148 (MQ=255)
                                                                                         gCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACGCGGCTGATGGCCCCTCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGTCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGAtt                                                       <  5:152466/149‑1 (MQ=255)
                                                                                            aCCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGAtt                                                       >  2:306263/1‑146 (MQ=255)
                                                                                            aCCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGAtt                                                       <  1:306263/146‑1 (MQ=255)
                                                                                            aCCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGcc                                                    <  2:113495/149‑1 (MQ=255)
                                                                                                gCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTg                                                                                     <  3:243059/112‑1 (MQ=255)
                                                                                                gCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTAGGCCCGGCGCGTTTg                                                                                     >  4:243059/1‑112 (MQ=255)
                                                                                                  gagaCCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGccc                                              >  7:219423/1‑149 (MQ=255)
                                                                                                    gaCCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCccgt                                            <  8:3147/149‑1 (MQ=255)
                                                                                                      ccAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCccgtgg                                          <  8:219423/149‑1 (MQ=255)
                                                                                                       cAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATc                                                            >  4:233112/1‑130 (MQ=255)
                                                                                                       cAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATc                                                            <  3:233112/130‑1 (MQ=255)
                                                                                                        aGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCccgtggcc                                        <  7:125120/149‑1 (MQ=255)
                                                                                                          cTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCccgtggccgt                                      <  5:252691/149‑1 (MQ=255)
                                                                                                             gAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGGTTTGTCACTTCCTCGATCAGATTGCCGTGCccgtggccgtgg                                    >  5:239697/1‑148 (MQ=255)
                                                                                                              aGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGaa                                  <  7:132845/149‑1 (MQ=255)
                                                                                                                cctgcctTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGt                                >  3:177032/1‑149 (MQ=255)
                                                                                                                    cctTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTgcg                             >  7:11595/1‑148 (MQ=255)
                                                                                                                      ttCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCaa                          >  3:114825/1‑149 (MQ=255)
                                                                                                                          aCTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCAACCAg                      <  3:118241/149‑1 (MQ=255)
                                                                                                                            tgcccccGGCTGATGGCCCCGCTGGGCCGGCGCGTATCCCCCTACGGGCTGCAGTTGCAGGCCAGGTTCGGCCGGGCGCGGTTGGGTGAGATGTGTCACTTCCTCGATCAGATGGACGTGCCCCTGGCCGGGGCAGTGAGCGCCCAggg                    >  6:304327/5‑148 (MQ=255)
                                                                                                                               aCCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCAACCAGGCCtt                 >  6:10053/1‑149 (MQ=255)
                                                                                                                                 ccGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCAACCAGGCCtttt               <  4:114825/149‑1 (MQ=255)
                                                                                                                                   ggCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTc                                                                <  6:86198/98‑1 (MQ=255)
                                                                                                                                   ggCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTc                                                                >  5:86198/1‑98 (MQ=255)
                                                                                                                                     gcgccggCCCAGCGGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCAACCAGGCCttttt              >  2:114477/6‑146 (MQ=255)
                                                                                                                                     gcgccggCCCAGCGGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCCCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCAACCAGGCCttttt              <  1:114477/141‑1 (MQ=255)
                                                                                                                                              ccGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCAACCAGGCCTTTTTTGCCAAGGGTGa  <  4:13868/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
CGCTCCCGGCACCATTGCCCGCTGGGCGCAGCTCATGCCCGAGCACTTTCGCTTCACTGCCAAGTTTCCGCGGGATGTCAGCCATGAAGGCGACCTGCGAGACCAGCTTGAGCCTGCCTTCGACTTCACCCGGCTGATGGCCCCGCTGGGCCGGCGCGTATCACCCTACTGGCTGCAGTTGCCGGCCCAGTTCGGCCCGGCGCGTTTGGGTGAGCTTTGTCACTTCCTCGATCAGATTGCCGTGCCCGTGGCCGTGGAAGTGCGCAACCAGGCCTTTTTTGCCAAGGGTGA  >  NC_002947/1714321‑1714611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑