Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,716,051 C→T 6.5% P56L (CCA→CTA)  PP_1511 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,716,0510CT 6.5% 181.6 / 2.0 61P56L (CCA→CTA) PP_1511hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (27/30);  new base T (2/2);  total (29/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01

TACTGGCCGGCCTGCTGACGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGAGCAGCAGCTTTCTGGCCAGTTG  >  NC_002947/1715904‑1716198
                                                                                                                                                   |                                                                                                                                                   
tACTGGCCGGCCTGCTGACGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGAccc                                                                                                                                                     >  7:315533/1‑148 (MQ=255)
  cTGGCCGGCCTGCTGACGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCa                                                                                                                                                    <  7:245434/147‑1 (MQ=255)
    ggccggccTGCTGACGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGc                                                                                                                                                >  7:177030/1‑149 (MQ=255)
      ccggccTGCTGACGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCtg                                                                                                                                              >  5:111570/1‑149 (MQ=255)
         gccTGCTGACGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGc                                                                                                                                           >  5:179865/1‑149 (MQ=255)
           ctgctgACGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCg                                                                                                                                         <  3:157639/149‑1 (MQ=255)
              ctgACGGTGGCCGGCCTTGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGTAAGTACGCCACCCGCCCAACCTTCTTTCCCCCTACAAACTTTCGCTCCTACTTCATGACCCAACGCTGTGCCGGCa                                                                                                                                      <  7:55473/149‑1 (MQ=255)
                 aCGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGgc                                                                                                                                   <  2:240595/149‑1 (MQ=255)
                 aCGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGgc                                                                                                                                   >  7:259022/1‑149 (MQ=255)
                  cGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGCCGTACGCCCGCCGCCCACCCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCACCGCTGTGCCGGCAGgcg                                                                                                                                  >  8:270684/1‑149 (MQ=255)
                            ccTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCa                                                                                                                        <  5:330569/149‑1 (MQ=255)
                             cTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAg                                                                                                                       <  2:297009/149‑1 (MQ=255)
                                 tCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCAc                                                                                                                   <  8:259022/149‑1 (MQ=255)
                                         ttCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTa                                                                                                           >  3:164064/1‑149 (MQ=255)
                                                   gcctgcctGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGcac                                                                                                   >  6:368100/1‑147 (MQ=255)
                                                   gcctgcctGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACaa                                                                                                 >  7:87497/1‑149 (MQ=255)
                                                     ctgcctgcCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGc                                                                                               >  8:98010/1‑149 (MQ=255)
                                                     ctgcctgcCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGc                                                                                               <  8:315533/149‑1 (MQ=255)
                                                       gcctgccACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCg                                                                                             >  1:25112/1‑149 (MQ=255)
                                                             cacaTGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGcc                                                                                       <  2:25112/149‑1 (MQ=255)
                                                              acaTGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGAcgccgg                                                                                      <  6:179865/149‑6 (MQ=255)
                                                              acaTGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGccc                                                                                      >  1:38614/1‑149 (MQ=255)
                                                                 tGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCt                                                                                                                                >  3:320319/1‑104 (MQ=255)
                                                                 tGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCt                                                                                                                                <  4:320319/104‑1 (MQ=255)
                                                                    aaCCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGAccc                                                                                                                                                     >  2:38844/1‑80 (MQ=255)
                                                                    aaCCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGAccc                                                                                                                                                     <  1:38844/80‑1 (MQ=255)
                                                                    aaCCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTc                                                                                <  5:368100/149‑1 (MQ=255)
                                                                    aaCCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTCTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTc                                                                                >  8:251526/1‑149 (MQ=255)
                                                                     aCCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCg                                                                               >  6:333785/1‑149 (MQ=255)
                                                                       cccTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGc                                                                             <  5:333785/149‑1 (MQ=255)
                                                                       cccTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGc                                                                             <  8:177030/149‑1 (MQ=255)
                                                                            ggCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAAc                                                                         <  6:111570/148‑1 (MQ=255)
                                                                                ccgcTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGccc                                                                    <  7:294190/149‑1 (MQ=255)
                                                                                      gACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGc                                                               <  7:286862/148‑1 (MQ=255)
                                                                                         gTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGCCAGCCCGGCGTc                                                                                >  1:104381/1‑128 (MQ=255)
                                                                                         gTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTc                                                                                <  2:104381/128‑1 (MQ=255)
                                                                                            cGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCTAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGca                                                                                                    >  6:265608/1‑105 (MQ=255)
                                                                                            cGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCTAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGca                                                                                                    >  6:260629/1‑105 (MQ=255)
                                                                                            cGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCTAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGca                                                                                                    <  5:265608/105‑1 (MQ=255)
                                                                                            cGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCTAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGca                                                                                                    <  5:260629/105‑1 (MQ=255)
                                                                                             gCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTg                                                                <  1:244440/140‑1 (MQ=255)
                                                                                             gCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTg                                                                >  2:244440/1‑140 (MQ=255)
                                                                                             gCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTa                                                       <  4:164064/149‑1 (MQ=255)
                                                                                               cAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATg                                                     >  3:100556/1‑149 (MQ=255)
                                                                                                     cccAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCAt                                               >  3:69841/1‑149 (MQ=255)
                                                                                                             gctgACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGcc                                                                                              >  4:1749/1‑94 (MQ=255)
                                                                                                             gctgACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGcc                                                                                              <  3:1749/94‑1 (MQ=255)
                                                                                                                 aCCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGggcggc                                     <  4:69841/147‑1 (MQ=255)
                                                                                                                  cccccTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAg                                  <  8:87497/149‑1 (MQ=255)
                                                                                                                   ccccTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAgg                                 >  1:73408/1‑149 (MQ=255)
                                                                                                                        aCAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGggcggc                                     <  6:363331/140‑1 (MQ=255)
                                                                                                                        aCAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGggcggc                                     >  5:363331/1‑140 (MQ=255)
                                                                                                                         cAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGc                                                                             >  5:183999/1‑99 (MQ=255)
                                                                                                                         cAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGc                                                                             <  6:183999/99‑1 (MQ=255)
                                                                                                                         cAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGc                           >  4:14019/1‑149 (MQ=255)
                                                                                                                           aaCTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTg                         <  2:73408/149‑1 (MQ=255)
                                                                                                                              tGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAAATGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCTGGCGCGGCTGag                       >  7:209177/1‑148 (MQ=255)
                                                                                                                              tGTCGCGCCTAAGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGagc                      >  6:340710/1‑149 (MQ=255)
                                                                                                                                  gcgcCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGagcagca                  <  5:340710/149‑1 (MQ=255)
                                                                                                                                   cgcCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCgg                                                                              >  5:257248/1‑88 (MQ=255)
                                                                                                                                   cgcCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCgg                                                                              <  6:257248/88‑1 (MQ=255)
                                                                                                                                    gcCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGagcagcagc                >  4:147689/1‑149 (MQ=255)
                                                                                                                                     ccTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGAGCAGCAGCt               <  7:251526/149‑1 (MQ=255)
                                                                                                                                         cgcgATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGAGCAGCAGCTTTCt           <  3:14019/149‑1 (MQ=255)
                                                                                                                                                  ccAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGAGCAGCAGCTTTCTGGCCAGTTg  >  3:158125/1‑149 (MQ=255)
                                                                                                                                                  ccAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGAGCAGCAGCTTTCTGGCCAGTTg  >  2:57082/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TACTGGCCGGCCTGCTGACGGTGGCCGGCCTGGTCTGGCACTTCGGCTGGCGCCTGCCTGCCACATGGAACCCCTGGGCGCCGCTGGACGTACGCCAGCCGCCCAACCTGCTGACCCCCTACAAACTGTCGCGCCTACGCGATGACCCAACGCTGTGCCGGCAGGCGCTGGAAACCAGCCACCTGCGTTACCGGGCACAAGCCGACAGCCCGGCGTCGGCCAACTGCCCGCTGCAGAACGTATGGCGCATCGAGGGCGGCCAGGCGCGGCTGAGCAGCAGCTTTCTGGCCAGTTG  >  NC_002947/1715904‑1716198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: