Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,004,573 T→C 7.9% intergenic (+63/+87) PP_1787 → / ← PP_1788 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,004,5730TC 7.9% 176.9 / 4.0 63intergenic (+63/+87)PP_1787/PP_1788hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (26/32);  new base C (3/2);  total (29/34)
Fisher's exact test for biased strand distribution p-value = 6.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01

CCCGTATTTTCAAGGTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTT  >  NC_002947/2004427‑2004718
                                                                                                                                                  |                                                                                                                                                 
cccGTATTTTCAAGGTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGAAGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCACCTTGACATGCCCCGAAAATGAATTAGCTTATTGCAGAttt                                                                                                                                                  >  4:108282/1‑148 (MQ=255)
    tATTTTCAAGGTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAAATCTGCaa                                                                                                                                              >  7:220122/1‑148 (MQ=255)
     aTTTTCAAGGTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAAt                                                                                                                                             >  1:38163/1‑148 (MQ=255)
      ttttCAATGTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGAATGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCGCCGAAAATGAAATAGCTTATTGCAGATTTGCAATaa                                                                                                                                           <  1:154148/149‑1 (MQ=255)
        ttCAAGGTTTCAAACTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAAATCTGCAATAAg                                                                                                                                          <  8:220122/148‑1 (MQ=255)
         tCAAGGTTTGAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTg                                                                                                                                                 <  6:147053/140‑1 (MQ=255)
         tCAAGGTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCACCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCagatagg                                                                                                                                         >  5:147053/1‑142 (MQ=255)
             ggTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCACGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTAtt                                                                                                                                     >  5:367630/1‑148 (MQ=255)
              gTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTc                                                                                                                                   <  4:277099/149‑1 (MQ=255)
                   aaaGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTAttt                                                                                                                                    >  4:282856/1‑143 (MQ=255)
                   aaaGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTAttt                                                                                                                                    <  3:282856/143‑1 (MQ=255)
                    aaGTTCGCGGTCGAAATTTAAAAGTGAGATTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAAtt                                                                                                                             <  3:245168/149‑1 (MQ=255)
                         cgctGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGt                                                                                                                          <  4:353453/147‑1 (MQ=255)
                         cgcgGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATGGCATATTTGCAATAAGCTATTTCTAAATTTGt                                                                                                                          >  4:33725/1‑147 (MQ=255)
                                gAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAgg                                                                                                                 <  2:38163/149‑1 (MQ=255)
                                gAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAgg                                                                                                                 <  8:277339/149‑1 (MQ=255)
                                    tttAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGAt                                                                                                             <  8:168918/149‑1 (MQ=255)
                                                ttttttGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGAt                                                                                                             <  3:153873/137‑1 (MQ=255)
                                                ttttttGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGAt                                                                                                             >  4:153873/1‑137 (MQ=255)
                                                ttttttGACGTGACAGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGa                                                                                                 <  4:134190/149‑1 (MQ=255)
                                                     tGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGAtgtg                                                                                             >  3:337060/1‑148 (MQ=255)
                                                       aCGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGaa                                                                                           >  8:127067/1‑148 (MQ=255)
                                                        cGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGaaa                                                                                          <  1:320519/148‑1 (MQ=255)
                                                         gTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAAcc                                                                                        >  8:6029/1‑149 (MQ=255)
                                                           gACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGtttttt                                                                                                    >  6:27345/1‑135 (MQ=255)
                                                           gACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGtttttt                                                                                                    <  5:27345/135‑1 (MQ=255)
                                                             cTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTc                                                                                    <  5:49070/149‑1 (MQ=255)
                                                                   tGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCt                                                                                >  2:161040/1‑147 (MQ=255)
                                                                         ttaatgcttaatAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCttt                                                                        >  2:34822/1‑149 (MQ=255)
                                                                           aatgcttaatAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTtg                                                                       <  6:74778/148‑1 (MQ=255)
                                                                               cttaatAAGAAATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGAtg                                                                  <  2:12332/149‑1 (MQ=255)
                                                                                  aataaGATATTTATAGTCTACCTACCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATAGGTTTTTTGGATCTGAAACCGCTCGCCTCAGGCTTTGTGAtgtg                                                                >  1:241866/1‑148 (MQ=255)
                                                                                    taaGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTAt                                                             >  6:170136/1‑149 (MQ=255)
                                                                                           tttATAGTCTACCTCCCCTTGACATGCCCCTAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGa                                                       <  3:108282/148‑1 (MQ=255)
                                                                                            ttATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGAt                                                                   <  7:38436/135‑1 (MQ=255)
                                                                                            ttATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGAt                                                                   >  8:38436/1‑135 (MQ=255)
                                                                                               taGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAgt                                                   <  1:34822/148‑1 (MQ=255)
                                                                                               taGTCTACCTCCCATTGACATGCCCCTAAAATTAAATAGCTTATTGCAGATTTTCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAgtg                                                  <  4:337060/149‑1 (MQ=255)
                                                                                                      ccTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTATTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGAGTATTTATGATAGTGTTGATc                                            >  3:152213/1‑148 (MQ=255)
                                                                                                       cTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTAGCCTCAGGCTTTGTGATGTTTATTTATGATAGTTTTGATCt                                           >  4:326902/1‑148 (MQ=255)
                                                                                                         ccccTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCt                                           >  6:61418/1‑146 (MQ=255)
                                                                                                         ccccTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAg                                        <  8:191869/149‑1 (MQ=255)
                                                                                                          cccTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAgt                                                   <  8:154723/137‑1 (MQ=255)
                                                                                                          cccTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAgt                                                   >  7:154723/1‑137 (MQ=255)
                                                                                                          cccTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTaa                                         <  7:6029/147‑1 (MQ=255)
                                                                                                           ccTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGa                                                                                            >  2:127132/1‑95 (MQ=255)
                                                                                                           ccTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGa                                                                                            <  1:127132/95‑1 (MQ=255)
                                                                                                            cTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCtt                                     <  6:367630/149‑1 (MQ=255)
                                                                                                                   tGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATATGTATTTATGATAGTGTTGATCTAAGCTTGCAATAc                              <  3:252650/149‑1 (MQ=255)
                                                                                                                      cccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGa                           >  2:165683/1‑149 (MQ=255)
                                                                                                                       ccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAgtgt                                                 <  6:186617/126‑1 (MQ=255)
                                                                                                                       ccGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAgtgt                                                 >  5:186617/1‑126 (MQ=255)
                                                                                                                         gAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTg                        <  5:61418/149‑1 (MQ=255)
                                                                                                                            aaTGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGtt                     >  8:308327/1‑149 (MQ=255)
                                                                                                                            aaTGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGtt                     >  6:280719/1‑149 (MQ=255)
                                                                                                                                aaaTAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTg                                               <  2:193711/119‑1 (MQ=255)
                                                                                                                                aaaTAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTg                                               >  1:193711/1‑119 (MQ=255)
                                                                                                                                  aTAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATg               <  5:170136/149‑1 (MQ=255)
                                                                                                                                   tAGCTTATTGCAAATCTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATgg              >  1:3438/1‑149 (MQ=255)
                                                                                                                                      cTTATTGCAAATCTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACg                             >  2:60951/1‑131 (MQ=255)
                                                                                                                                      cTTATTGCAAATCTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACg                             <  1:60951/131‑1 (MQ=255)
                                                                                                                                        tATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATatgaa                           >  8:158132/1‑127 (MQ=255)
                                                                                                                                               gATTTGCAATTAGCTATTTCTAATTTTGTTAGCTGATGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCttttt  <  7:127067/149‑1 (MQ=255)
                                                                                                                                               gATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCttttt  <  2:296547/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
CCCGTATTTTCAAGGTTTCAAAGTTCGCGGTCGAAATTTAAAAGTGAGTTTTTTGACGTGACTGAAATGACGCTTAATGCTTAATAAGATATTTATAGTCTACCTCCCCTTGACATGCCCCGAAAATGAAATAGCTTATTGCAGATTTGCAATAAGCTATTTCTAAATTTGTTAGCTGAGGCGATCGGTTTTTTGGATGTGAAACCGCTCGCCTCAGGCTTTGTGATGTGTATTTATGATAGTGTTGATCTAAGCTTGCAATACGGATTGGTTTTAATGGTGCCATCTTTTT  >  NC_002947/2004427‑2004718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑