| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,482,511 | T→A | 7.0% | intergenic (‑136/‑42) | PP_2176 ← / → PP_2177 | transcriptional regulator, LysR family/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,482,511 | 0 | T | A | 7.0% | 256.7 / 8.0 | 86 | intergenic (‑136/‑42) | PP_2176/PP_2177 | transcriptional regulator, LysR family/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (37/43); new base A (3/3); total (40/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 | |||||||||||
AGGATTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATCGACCGTTCGG > NC_002947/2482363‑2482658 | aggaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAAtttt > 1:42043/1‑149 (MQ=255) gaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCa > 3:257176/1‑149 (MQ=255) aGCCACGAGGATACTCGCCGAGAGCCTGTAAAGAAACCCGCGCCACCGCAGCAAATCCGCCACGTTTCGAAGCAAGCCCTATGTGGGCGGCTGCAAATTTCCATCGTTAGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGaa > 6:336818/1‑148 (MQ=255) cACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAAt < 3:301109/149‑1 (MQ=255) cACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAAt < 2:90303/149‑1 (MQ=255) ctaGGCTACTCGCCGATCGCCTGTAAAGAAACCAGAGCCACCTCAGCCAATCCGCCACGTTGCGCAGCAATCCCTCTGTTGGCGGCTGCACATTTCCATCGTTCGGCTTGACTCGTGAAATTTTTCATGTAAATTTTCATGAAAAATaa < 8:126445/147‑1 (MQ=255) cGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATaa < 5:256070/149‑1 (MQ=255) cGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGCTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATaa < 5:69379/149‑1 (MQ=255) aGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGt < 4:257176/149‑1 (MQ=255) aGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttca < 3:235663/149‑5 (MQ=255) aCTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcacg < 5:110280/146‑7 (MQ=255) aCTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcacg > 6:110280/1‑140 (MQ=255) tCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTaaaaa > 4:193249/1‑149 (MQ=255) gCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGATATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAAtt > 5:311370/1‑149 (MQ=255) gCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTc < 1:175380/127‑1 (MQ=255) gCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTc > 2:175380/1‑127 (MQ=255) gCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCAt < 4:205467/129‑1 (MQ=255) gCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCAt > 3:205467/1‑129 (MQ=255) gcgcCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCGTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACg < 6:11547/149‑1 (MQ=255) cgcCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACgg < 7:116157/149‑1 (MQ=255) cgcCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACgg < 2:217163/149‑1 (MQ=255) gcCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACgg > 8:23998/1‑148 (MQ=255) gAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGaaa < 6:311370/149‑1 (MQ=255) gAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGaa > 8:289759/1‑148 (MQ=255) aCCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGa < 2:38060/149‑1 (MQ=255) aCCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGa < 7:331618/149‑1 (MQ=255) cccGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGAt < 7:178812/149‑1 (MQ=255) ccGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGAt > 6:59897/1‑148 (MQ=255) ccGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATg < 3:193249/149‑1 (MQ=255) gcgcCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATg > 4:140268/1‑147 (MQ=255) aCCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGc < 7:193773/149‑1 (MQ=255) cGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCAc < 5:59897/149‑1 (MQ=255) gCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAag < 7:23998/149‑1 (MQ=255) cAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAagag > 2:280026/1‑149 (MQ=255) cAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTAATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAagag > 6:117514/1‑149 (MQ=255) aaTCCGCCACGTTGCGCAGCAAGCCCTCTGTGTGCTGCTGCACATTTCCATCGTTAGGGTTTACGCGTGAAATTTTTCATGTAAATTTTCATTAAAAATAAGTCTAAAAATTTCACTGCAGTCAGAAACGATGAAGATGCACGAAGAgg < 5:336818/149‑1 (MQ=255) aaTCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCa > 4:347223/1‑141 (MQ=255) aaTCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCa < 3:347223/141‑1 (MQ=255) aaTCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAgg > 4:345473/1‑149 (MQ=255) aaTCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAgg > 1:202813/1‑149 (MQ=255) tCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGtt > 2:50340/1‑149 (MQ=255) cGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTg > 1:12413/1‑148 (MQ=255) gCCACGTTGCGCATCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGaa < 7:199267/149‑1 (MQ=255) gCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTg > 5:91387/1‑147 (MQ=255) gCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGaa < 6:185060/149‑1 (MQ=255) gCCACGTTGCGCAGCAAGCCCTCTGGTGGCTGCTGCACATTTCCTTCGTTCTGCTTTACGAGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCTCGATTAGGTTTaa < 8:84124/149‑1 (MQ=255) ccACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAg < 7:289759/149‑1 (MQ=255) cACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTAATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGaa < 5:117514/147‑1 (MQ=255) gcgcAGCAAGCCCTCTCTGGTCGTCTGCACATTTCCATCGTTCGGCTAGACGCCTGAATTTTTTCAAGTAAATTATCATGAAAAATAAGTCTAAAAATTTGACGGCAGTCCGAAACGATTAAGATGCACGAAGATGTTGAAGCCCTcg < 8:176252/148‑1 (MQ=255) gcagcaAGCCCTCTGTGGGCGGATGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGa > 7:55747/1‑149 (MQ=255) agcaAGGCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATTCACGAAGAGGTTGAAGCCCTCGCGATc < 8:257683/149‑1 (MQ=255) gcaAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTcg > 5:299473/1‑143 (MQ=255) gcaAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTcg < 6:299473/143‑1 (MQ=255) caAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCt > 5:18591/1‑149 (MQ=255) aGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTa < 4:268493/149‑1 (MQ=255) tctGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGATATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCAc > 2:121137/1‑149 (MQ=255) tgGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGAc < 2:202813/148‑1 (MQ=255) gcggcTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAaga > 8:849/1‑114 (MQ=255) tGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCaaa > 1:234090/1‑149 (MQ=255) tGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCaaa > 5:346290/1‑149 (MQ=255) cacaTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAAt > 1:318572/1‑148 (MQ=255) acaTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGaa < 7:296457/94‑1 (MQ=255) acaTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGaa > 8:296457/1‑94 (MQ=255) acaTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAAtt > 3:353856/1‑148 (MQ=255) aTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCaa < 6:18591/149‑1 (MQ=255) aTTTCCATCGCTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTc > 6:198418/1‑147 (MQ=255) tttCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAg < 4:353856/149‑1 (MQ=255) cATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAAc < 2:12413/148‑1 (MQ=255) gTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGAc < 2:42043/149‑1 (MQ=255) gCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTgg < 2:234090/149‑1 (MQ=255) gACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGTTg > 6:275031/1‑148 (MQ=255) gACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGt < 1:50340/147‑1 (MQ=255) gacttaTTTTTCATGAAAATTTACATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTgg > 3:49148/6‑149 (MQ=255) gTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTgg > 7:100798/1‑149 (MQ=255) gTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTgg > 2:295774/1‑149 (MQ=255) tGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGc < 3:140268/149‑1 (MQ=255) acttaTTTTTCATGAAAATTTACATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAAc > 5:208186/5‑145 (MQ=255) acttaTTTTTCATGAAAATTTACATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAAc < 6:208186/141‑1 (MQ=255) aaaTTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGcc > 8:260911/1‑148 (MQ=255) tttttCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAgc < 8:100798/149‑1 (MQ=255) tttttCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAgc < 7:283461/149‑1 (MQ=255) tttttCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAAAGATGAAGATGCACGAAGAGGTTGAAGCGCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAgc < 5:177195/149‑1 (MQ=255) aTGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATc > 2:248517/1‑148 (MQ=255) tGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATCGa > 2:6471/1‑149 (MQ=255) tAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATc > 5:267769/1‑145 (MQ=255) tAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATc < 6:267769/145‑1 (MQ=255) aaaTTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATCGACCg > 8:28304/1‑149 (MQ=255) ttCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATCGACCGTTCgg > 5:9863/1‑149 (MQ=255) | AGGATTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATCGACCGTTCGG > NC_002947/2482363‑2482658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |