| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,495,416 | C→T | 10.5% | intergenic (+7/+16) | PP_2188 → / ← PP_2189 | tRNA 2‑methylthio‑N6‑isopentenyl adenosine(37) hydroxylase MiaE/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,495,416 | 0 | C | T | 10.5% | 209.1 / 9.9 | 76 | intergenic (+7/+16) | PP_2188/PP_2189 | tRNA 2‑methylthio‑N6‑isopentenyl adenosine(37) hydroxylase MiaE/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (38/30); new base T (4/4); total (42/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 | |||||||||||
AAACTGGCGCACAACTACGGTGATGAAGCGGACATCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCTTGCTGCGCACGTTG > NC_002947/2495269‑2495564 | aaaCTGGCGCACAACTACGGTGATGAAGCGGACATCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCAc > 2:351969/1‑148 (MQ=255) atgaAGCGGACATCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGcc > 1:238061/1‑141 (MQ=255) atgaAGCGGACATCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGcc < 2:238061/141‑1 (MQ=255) gCGGACATCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCgg < 1:152654/149‑1 (MQ=255) ggACATCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGcc < 8:232679/149‑1 (MQ=255) aTCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGTTGGGCACCA‑GGCGGCGCAGGc > 5:313713/1‑129 (MQ=255) aTCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGc < 6:313713/129‑1 (MQ=255) aTCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCAACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAg > 6:363084/1‑148 (MQ=255) tcgctcgcTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAg > 1:297296/1‑147 (MQ=255) gcgcacgctGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAg > 2:34791/2‑147 (MQ=255) gctcgctGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTaa < 5:163899/131‑1 (MQ=255) gctcgctGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTaa > 6:163899/1‑131 (MQ=255) ctcgctGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAg > 3:336388/1‑147 (MQ=255) gcttcttCGAGATGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCGTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAg < 3:312200/141‑1 (MQ=255) tCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCg > 2:66453/1‑149 (MQ=255) gAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGcc > 6:126525/1‑149 (MQ=255) cgcaCGCCCGCCCGAAATGCAGCTGACCCAGGCCCCCGCCCATGCGCTGCCCGTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGccc < 8:304614/146‑1 (MQ=255) aCGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAg > 1:27224/1‑149 (MQ=255) cgcgcgGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAg < 6:173226/148‑1 (MQ=255) cgcgGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGcc < 1:351969/149‑1 (MQ=255) ggcggAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGc < 2:313336/149‑1 (MQ=255) ggAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGa < 5:260366/149‑1 (MQ=255) aaaTGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCAACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGaaa < 5:363084/149‑1 (MQ=255) aTGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGaaa > 2:85690/1‑147 (MQ=255) aTGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCATAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATa < 4:154012/149‑1 (MQ=255) aGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTAcc > 5:248570/1‑121 (MQ=255) aGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTAcc < 6:248570/121‑1 (MQ=255) gCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGc < 8:88005/111‑1 (MQ=255) tGATCCAGTTACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGaaa < 4:329506/140‑1 (MQ=255) tGATCCAGTTACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGaaa > 3:329506/1‑140 (MQ=255) tCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCt < 2:297296/149‑1 (MQ=255) cAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGc > 2:155044/1‑149 (MQ=255) aGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAAATGCGCCGGCCCAGAAGCAGGCCTACCGCCAGACCGACGCCGGCAGAAAGAGCACCAGTCTGc > 8:144798/1‑148 (MQ=255) gTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACGA‑GTCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCa < 7:232829/149‑1 (MQ=255) accagaccagGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGGCGGCAGAAATAGCAACAGTCTGCCAggg < 4:230989/149‑1 (MQ=255) accagaccagGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAggg > 3:180291/1‑149 (MQ=255) accagaccagGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAggg > 1:241847/1‑149 (MQ=255) accagaccagGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAggg > 3:230989/1‑149 (MQ=255) cagaccagGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCtt > 1:34924/1‑77 (MQ=255) cagaccagGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCtt < 2:34924/77‑1 (MQ=255) agaccagGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTg > 6:183981/1‑149 (MQ=255) accagGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGgc > 5:172597/1‑149 (MQ=255) gCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGAt < 1:34791/149‑1 (MQ=255) ttCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTcc > 4:304429/1‑149 (MQ=255) ttCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTcc > 2:237799/1‑149 (MQ=255) cacaGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTg < 1:66453/148‑1 (MQ=255) acaGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTggg > 2:63616/1‑149 (MQ=255) acaGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTggg > 8:10566/1‑149 (MQ=255) cGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGc < 4:180291/149‑1 (MQ=255) cATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTc < 4:336388/149‑1 (MQ=255) cATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTc < 1:85690/149‑1 (MQ=255) tCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTcca > 8:156308/1‑149 (MQ=255) tCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTcca > 5:222359/1‑149 (MQ=255) cGCAGGCTTTGGCCGCCTGATGGGCACCAGGGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGgccgcc > 1:219688/1‑124 (MQ=255) cGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGgccgcc < 2:219688/123‑1 (MQ=255) cGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTccacca > 4:197881/1‑149 (MQ=255) cAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCaccacc < 5:183981/149‑1 (MQ=255) gCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAg > 1:262645/1‑107 (MQ=255) gCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAg < 2:262645/107‑1 (MQ=255) gCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGt > 3:234811/1‑149 (MQ=255) gCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGt < 7:144798/149‑1 (MQ=255) gccgccTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGcc > 6:103967/1‑149 (MQ=255) ccgccTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCt < 3:304429/149‑1 (MQ=255) ccgccTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGACCAGTAGCAGGCCTACAGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGACAGGGGTGGCCGCCGATGTAGTCATGGGTGGCGTCCACCAACCGTTGCGACt > 7:268778/1‑149 (MQ=255) cgccTGGTGCCCATCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATa < 7:60579/84‑1 (MQ=39) cgccTGGTGCCCATCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATa > 8:60579/1‑84 (MQ=39) cgccTGGTGCCCATCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCt > 6:96138/1‑94 (MQ=255) cgccTGGTGCCCATCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCt < 5:96138/94‑1 (MQ=255) cgccTGGTGCCCATCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTgcgc < 7:13665/146‑1 (MQ=255) cgccTGGTGCCCATCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTgcgc > 8:13665/1‑146 (MQ=255) cgccTGGTGCCCATCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCtg > 2:204773/1‑148 (MQ=255) cgccTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCCCCACCGGTTGCGCCtt > 3:81461/1‑149 (MQ=255) gccTGGTGCCCATCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCTtg < 1:204773/149‑1 (MQ=255) tGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCTTGCTgcg > 5:166574/1‑148 (MQ=255) gCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCTTGCTGCGCACg > 5:39427/1‑149 (MQ=255) aCCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCTTGCTGCGCACGtt > 6:355110/1‑149 (MQ=255) aCCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCTTGCTGCGCACGtt > 3:216933/1‑149 (MQ=255) ccA‑GGCGGCGCCGTCCTTACCTGCGCCGGCCCAGGATCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCTTGCTGCGCACGTTg < 4:81461/149‑1 (MQ=255) | AAACTGGCGCACAACTACGGTGATGAAGCGGACATCGCTCGCTGCGTCGAGCTGGTACGCGCGGCGGAAATGGAGCTGATCCAGTCACCAGACCAGGAGCTGCGCTTCCACAGCGGCATCCCGCAGGCTTTGGCCGCCTGATGGGCACCA‑GGCGGCGCAGGCCTTAACTGCGCCGGCCCAGTAGCAGGCCTACCGCCAGCCCGAGGCCGGCAGAAATAGCAACAGTCTGCCAGGGGTGGCCGCCGATGTAGTCCTGGGTGGCGTCCACCACCGGTTGCGCCTTGCTGCGCACGTTG > NC_002947/2495269‑2495564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |