| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,526,413 | G→T | 7.9% | K219N (AAG→AAT) ‡ | PP_2215 → | acetyl‑CoA acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,526,413 | 0 | G | T | 7.9% | 273.2 / 10.4 | 88 | K219N (AAG→AAT) ‡ | PP_2215 | acetyl‑CoA acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (47/34); new base T (5/2); total (52/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.41e-01 | |||||||||||
CCCAGGCCAATGCCTTCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAGGCC > NC_002947/2526265‑2526560 | cccAGGCCAATGCCTTCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAg < 1:358785/149‑1 (MQ=255) ccAGGCCAATGCCTTCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAg > 6:176731/1‑148 (MQ=255) ccAATGCCTTCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGAc < 5:106678/149‑1 (MQ=255) aaTGCCTTCAGCCGCGAGGCCCAGGACCAGTGCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAATCGCGTCATCAAGGATGACGa < 6:113903/149‑1 (MQ=255) ttCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCTCGTCATCCTTGATGACgcgctttt > 6:353170/1‑145 (MQ=255) ttCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAgcc > 4:264512/1‑149 (MQ=255) tCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAgccg > 2:167832/1‑149 (MQ=255) tCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAgccg > 2:173247/1‑149 (MQ=255) cAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAgccg < 2:346552/148‑1 (MQ=255) ccAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGa < 5:14717/129‑1 (MQ=255) ccAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGa > 6:14717/1‑129 (MQ=255) ccAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTc > 8:49621/1‑149 (MQ=255) ccAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTc > 3:296035/1‑149 (MQ=255) cAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCt < 1:173247/149‑1 (MQ=255) cAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCt < 1:167832/149‑1 (MQ=255) cAGGACCAGTTAGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGACGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCt > 3:236714/1‑149 (MQ=255) aGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGa > 5:152548/1‑127 (MQ=255) aGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGa < 6:152548/127‑1 (MQ=255) gACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATAGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGa < 5:11621/149‑1 (MQ=255) ccAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGAc > 5:71643/1‑148 (MQ=255) cAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACaa < 5:282561/149‑1 (MQ=255) aGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCTCGTCATCCTTGATGACgcgc < 4:85815/123‑1 (MQ=255) aGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCTCGTCATCCTTGATGACgcgc > 3:85815/1‑123 (MQ=255) ttCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGAt > 1:76365/1‑149 (MQ=255) ttCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGAt > 6:310951/1‑149 (MQ=255) ttCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGAt > 6:177726/1‑149 (MQ=255) ccATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTgcg > 3:56409/1‑149 (MQ=255) cATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTgcg > 7:95852/1‑148 (MQ=255) tCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAg < 6:71643/149‑1 (MQ=255) gCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCaaa < 3:330655/148‑1 (MQ=255) cTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAAcc > 5:144045/1‑149 (MQ=255) ccGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAAc < 4:201298/143‑1 (MQ=255) ccGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAAc > 3:201298/1‑143 (MQ=255) aGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTg > 5:81197/1‑147 (MQ=255) aaGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAggc > 5:630/1‑149 (MQ=255) cATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCa > 8:203910/1‑149 (MQ=255) agcagcGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGt > 8:89120/1‑149 (MQ=255) agcagcGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGt < 3:264512/149‑1 (MQ=255) gcagcGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGt > 3:173940/1‑148 (MQ=255) agcGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGt > 6:61218/1‑132 (MQ=255) agcGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGt < 5:61218/132‑1 (MQ=255) gCCGTTTAGCCGCCGAGATCGTGCCGGTGGAAGGCACCGAGGGCAAGGAAAAGGGCGTCATGCAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGGTTCGTGAAGGCGGCACCGTGAcggcg < 6:179467/149‑1 (MQ=255) ccGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGAcggcgg < 4:56409/149‑1 (MQ=255) ccGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGAcggcgg < 7:49621/149‑1 (MQ=255) ccGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGAcggcgg < 6:630/149‑1 (MQ=255) cggtttGCCGCCGAGATCGTGCCGGTGGGAGTCCCCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGAGAAGATTGGGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACggcggc > 6:295078/4‑149 (MQ=255) ccgccgAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGc > 7:105155/1‑148 (MQ=255) ccgccgAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGc < 2:76365/148‑1 (MQ=255) cgccgAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGAc > 6:183493/1‑61 (MQ=255) cgccgAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGAc < 5:183493/61‑1 (MQ=255) cgccgAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCCCCGTGACGGCGGCCAACGc > 6:178552/1‑147 (MQ=255) cgccgAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCa < 4:296035/149‑1 (MQ=255) cgAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATGAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGAcggcg > 6:80462/1‑136 (MQ=255) cgAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGAcggcg < 5:80462/136‑1 (MQ=255) agagaTCGTGCCGGTGGAAGTCACCTAGGGAAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCTCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAACCCGGCGTTTCGTGAAGGCGGCACCGTGCCGGCGGCCAAGGCCAGtt > 8:177568/2‑149 (MQ=255) tGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCACCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTcc > 8:280897/1‑149 (MQ=255) aaGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGAcggcgct > 3:168271/1‑149 (MQ=255) gTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGcc < 2:323039/120‑1 (MQ=255) gTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGcc > 1:323039/1‑120 (MQ=255) tCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGAcggcgctgcg > 1:67310/1‑149 (MQ=255) aCCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGAcggcgctgcggc > 8:144331/1‑149 (MQ=255) aCCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGAcggcgctgcggc > 7:85740/1‑149 (MQ=255) aGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGAcggcgctgcggcgctg < 7:203910/149‑1 (MQ=255) gggCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTgg < 4:168271/149‑1 (MQ=255) gggCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTgg < 6:144045/149‑1 (MQ=255) ggCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTgg > 1:307266/1‑148 (MQ=255) cAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTg > 7:58349/1‑100 (MQ=255) cAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTg < 8:58349/100‑1 (MQ=255) aacgAAATGGGCGTCATCAAGGATGACGAGCAGGCGCCCAAGGCGCGGCTGGACAAGATTGCGCAGCTCAAACCGGGGTTTCCTGAAGGCGGCACCGTGACGGCGTCCAACGCCAGTTCGATTTCCGACGCCGCTGGGCCGCTGGTACt < 6:5654/146‑1 (MQ=255) aaGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGTGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGGGCTGGTACt > 4:229937/1‑149 (MQ=255) aaGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACt > 7:279729/1‑149 (MQ=255) aaGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACt > 5:141524/1‑149 (MQ=255) aaGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACt > 2:293646/1‑149 (MQ=255) aaGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACt > 3:317500/1‑149 (MQ=255) aaGGAAAAGCGCGTCAACAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCCATTTCAGACGGCGCTGCGCCGCTGGTACt > 5:5654/1‑149 (MQ=255) gctgctcgTCATCCTTGATGACGCGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATgc > 4:348047/7‑149 (MQ=255) aaaGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATgc < 7:89120/149‑1 (MQ=255) tgctcgTCATCCTTGATGACGAGCAGCCGCCCACGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCCACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATgcgc > 6:247598/5‑149 (MQ=255) tcgcgTCATCAAGGATGACGAGCAGCCGCCCAAGCCGCGTCTGGACAAGACTGCGCAGCTCAACCCGGAGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACTGCGCTGCGGCGCTGGTACTGATGcgcc < 6:13066/148‑1 (MQ=255) ctcgTCATCCTTGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTc > 4:87717/3‑110 (MQ=255) ctcgTCATCCTTGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTc < 3:87717/108‑1 (MQ=255) gcgTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGcgccg > 8:288755/1‑148 (MQ=255) gTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGcgccgc > 7:201795/1‑147 (MQ=255) gTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGcgccgc < 8:201795/147‑1 (MQ=255) atcaAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGTGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTcc > 2:240636/1‑147 (MQ=255) tcaAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAg > 6:39765/1‑149 (MQ=255) caAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAgg > 4:3359/1‑149 (MQ=255) aaGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAGGc < 7:144331/149‑1 (MQ=255) aGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGTGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAGGcc < 3:229937/149‑1 (MQ=255) aGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAGGcc < 7:288755/149‑1 (MQ=255) ggATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATg > 7:124918/1‑133 (MQ=255) ggATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATg < 8:124918/133‑1 (MQ=255) ggATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAGGcc > 6:207178/1‑148 (MQ=255) ggATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAGGcc > 5:278607/1‑148 (MQ=255) | CCCAGGCCAATGCCTTCAGCCGCGAGGCCCAGGACCAGTTCGCCATCGCCTCGCTGACCCGAGCGCAGGAAGCCATCAGCAGCGGCCGTTTTGCCGCCGAGATCGTGCCGGTGGAAGTCACCGAGGGCAAGGAAAAGCGCGTCATCAAGGATGACGAGCAGCCGCCCAAGGCGCGTCTGGACAAGATTGCGCAGCTCAAACCGGCGTTTCGTGAAGGCGGCACCGTGACGGCGGCCAACGCCAGTTCGATTTCCGACGGCGCTGCGGCGCTGGTACTGATGCGCCGCTCCGAGGCC > NC_002947/2526265‑2526560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |