| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,402,512 | A→G | 5.2% | intergenic (+36/‑116) | PP_3010 → / → PP_3011 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,402,512 | 0 | A | G | 5.2% | 226.8 / 2.2 | 78 | intergenic (+36/‑116) | PP_3010/PP_3011 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (37/36); new base G (2/2); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.26e-01 | |||||||||||
GTAGAGTTGCGGGGCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTATTTGGATGGAGAGTCGCAGGTG > NC_002947/3402366‑3402654 | gTAGAGTTGCGGGGCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGc > 7:300578/1‑149 (MQ=255) gagTTGCGGGGCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCggg > 5:227156/1‑149 (MQ=255) gagTTGCGGGGCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCgg < 7:126959/148‑1 (MQ=255) gagTTGCGGGGCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCgg > 8:126959/1‑148 (MQ=255) gCGGGTCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATTTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCTCTCGACGGCGGGCtat < 6:363101/148‑3 (MQ=255) gggCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTtgt < 2:332595/149‑1 (MQ=255) gCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTtgtgt < 3:176747/149‑1 (MQ=255) cACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTtgtgtg < 8:300578/149‑1 (MQ=255) gggAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGcc > 3:342733/1‑148 (MQ=255) aaGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATc > 2:160228/1‑149 (MQ=255) gcgagcgCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCTCTCGACGGCggg < 7:205506/130‑1 (MQ=255) gcgagcgCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCTCTCGACGGCggg > 8:205506/1‑130 (MQ=255) cgagcgCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGcc < 2:199772/149‑1 (MQ=255) cACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCgg > 5:189099/1‑149 (MQ=255) cTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGc > 6:180909/1‑148 (MQ=255) ccTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTtgtgtg < 6:153562/123‑1 (MQ=255) ccTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTtgtgtg > 5:153562/1‑123 (MQ=255) tATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCaaa > 5:36349/1‑148 (MQ=255) aaCGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCaaaaaaa < 1:160228/148‑1 (MQ=255) aaCGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAg > 7:14293/1‑149 (MQ=255) aCGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAgg > 7:296522/1‑149 (MQ=255) tGATGCCTGGGACGAGCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCGGCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCg < 6:306789/149‑1 (MQ=255) gATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCgg > 4:323276/1‑149 (MQ=255) tGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGt > 7:43873/1‑149 (MQ=255) ccTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAATGGGCGGGTg < 6:227156/148‑1 (MQ=255) gTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCAACCAACCCCCACACCAATAGCCCGCGGACGAGCGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCACCGTTAAAAAAAAGGCCGGGAGGCGcc > 8:251290/1‑149 (MQ=255) aCGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGACCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCgg > 5:331569/1‑149 (MQ=255) aCCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGGCGGTAt < 5:180909/149‑1 (MQ=255) aCCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTAt > 8:263581/1‑149 (MQ=255) cATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATgg < 3:323276/149‑1 (MQ=255) aTGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGc < 8:296522/149‑1 (MQ=255) tGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGcc > 5:304519/1‑149 (MQ=255) ggCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCt > 7:38539/1‑149 (MQ=255) cAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCgaga < 2:16469/76‑1 (MQ=255) cAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCgaga > 1:16469/1‑76 (MQ=255) gTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGag > 4:353800/1‑147 (MQ=255) gTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGag > 3:46275/1‑147 (MQ=255) ttGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGagcag < 4:149503/149‑1 (MQ=255) tGGATGCTGCACTGATGTGTTAAAAAGCGTAATCATCCAACCCCCACAACAATAGCCCGCAGTCGAGAGCGCTCTTTTTGTGTGCCAATCGCCTGCCCGGCAACGTTCAAAAAAAGTGCGGGTGGAGCCGGTATGGCCTGAGAAGAGtt > 4:273188/1‑149 (MQ=255) gATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGc > 7:12501/1‑149 (MQ=255) tgctgcACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCtt < 4:46275/149‑1 (MQ=255) gctgcACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCaa < 5:173922/105‑1 (MQ=255) gctgcACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCaa > 6:173922/1‑105 (MQ=255) ctgcACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGTGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCttt < 4:342733/148‑1 (MQ=255) ctgcACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCttt < 8:14293/148‑1 (MQ=255) tgcACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGc < 3:235028/121‑1 (MQ=255) tgcACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGc > 4:235028/1‑121 (MQ=255) tGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTg > 2:223510/1‑149 (MQ=255) aTGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGcc > 2:348801/1‑149 (MQ=255) ttCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGccc > 3:5396/1‑149 (MQ=255) ttCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGccc > 6:278199/1‑149 (MQ=255) tCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGc > 2:146495/1‑142 (MQ=255) tCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGc < 1:146495/142‑1 (MQ=255) cAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGcccc < 6:138950/148‑1 (MQ=255) aaaaGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCcccgc < 1:323035/149‑1 (MQ=255) aaaaGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTG‑CCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCcccgcc > 8:135867/1‑149 (MQ=255) aaaaGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTATTGTGTGCCCAACGCAAGCCCGGCAACGTAAAAAAAAAGGGCGGGTGGAGACGGAAAGGCCGGAGAACCGTTGAATTGAAATTGCAGAcccag > 2:323035/1‑146 (MQ=255) aaaGCCTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCcccgcc < 4:328780/149‑1 (MQ=255) aaccGTAATCATCCAACCCCCACCCCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCcccgccc < 7:251290/146‑1 (MQ=255) cGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCATa < 8:43873/149‑1 (MQ=255) tatcatcCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAata > 1:310463/2‑149 (MQ=255) atcatcCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAata < 6:189099/148‑1 (MQ=255) tcatcCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTG‑CCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTc < 7:135867/149‑1 (MQ=255) atcCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCg < 7:263581/149‑1 (MQ=255) tcCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGt < 8:12501/149‑1 (MQ=255) tcCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGt > 7:100232/1‑149 (MQ=255) cAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGtt < 5:278199/148‑1 (MQ=255) aaCCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGt < 6:36349/149‑1 (MQ=255) aCCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTa < 1:223510/149‑1 (MQ=255) ccccACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTAtt > 1:251232/1‑149 (MQ=255) cccACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTAttt < 6:304519/149‑1 (MQ=255) ccACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCt > 4:30930/1‑109 (MQ=255) ccACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCt < 3:30930/109‑1 (MQ=255) ccACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGtt > 4:102299/1‑142 (MQ=255) ccACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGtt < 3:102299/142‑1 (MQ=255) cAATAGCCCGACGTCGAGAGCGTGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTTGAGCCGGTATGGCCTTAGCAGCGTTGCTTTGCATTTGCCGGCACCGCCCGTAATATTCGTTGTATTttgatgga < 3:273188/149‑1 (MQ=255) aaaaaGCCCGCTCTCGACGGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTATTtggatg > 3:146121/5‑147 (MQ=255) aaTAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTC‑AAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTATTtggatgga > 5:91985/1‑147 (MQ=255) gCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTATTTGGATGGAGAGTc < 8:38539/149‑1 (MQ=255) cgTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTATTTGGATGGAGAGTCGCAGGt > 6:174139/1‑149 (MQ=255) gtagagaGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTATTTGGATGGAGAGTCGCAGGTg < 6:331569/146‑1 (MQ=255) | GTAGAGTTGCGGGGCACGGGAAGCGAGCGCCACTTCACGGCCTATCAACGTGATGCCTGGTACGACCATGGCAGGTTGCTGGATGCTGCACTGATGTGTTCAAAAGCGTAATCATCCAACCCCCACACCAATAGCCCGCCGTCGAGAGCGGGCTTTTTGTGTGCCCATCGCCTGCCCGGCAACGTTCAAAAAAAGGGCGGGTGGAGCCGGTATGGCCTGAGCAGCGTTGCTTTGCATTTGCCGGCCCCGCCCGTAATATTCGTTGTATTTGGATGGAGAGTCGCAGGTG > NC_002947/3402366‑3402654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |