Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,415,371 T→A 5.8% D15V (GAC→GTC)  PP_3028 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,415,3710TA 5.8% 214.8 / 2.8 69D15V (GAC→GTC) PP_3028hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (32/33);  new base A (2/2);  total (34/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01

ACGGCTTCCAGCCGAGTGCGGTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGCCGATCAGGCGGA  >  NC_002947/3415224‑3415511
                                                                                                                                                   |                                                                                                                                            
aCGGCTTCCAGCCGAGTGCGGTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCcgtc                                                                                                                                             >  6:326354/1‑149 (MQ=255)
aCGGCTTCCAGCCGAGTGCGGTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCcgtc                                                                                                                                             <  7:217901/149‑1 (MQ=255)
   gCTTCCAGCCGAGTGCGGTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCgtcgtc                                                                                                                                          <  1:235426/149‑1 (MQ=255)
       ccAGCCGAGTGCGGTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGcc                                                                                                                                      >  6:333927/1‑149 (MQ=255)
        cAGCCGAGTGCGGTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGcc                                                                                                                                      <  2:137857/148‑1 (MQ=255)
         aGCCGAGTGCGGTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTc                                                                                                                                    >  1:358566/1‑149 (MQ=255)
         aGCCGAGTGCGGGACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGGTGGACACAGGGCAACCGTGGGCGTCAGGGACCGTGCCTTCGTAGGTGCGCCTGCACATCCGGCAGTGATACAGGCCGACGTCGTCGGCCTc                                                                                                                                    >  5:31044/1‑149 (MQ=255)
                    gTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGCAcc                                                                                                                         >  2:54946/1‑149 (MQ=255)
                     tACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCa                                                                                                                        <  7:135806/149‑1 (MQ=255)
                      aCAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCaa                                                                                                                       >  2:252727/1‑149 (MQ=255)
                       cAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCaa                                                                                                                       <  5:333927/148‑1 (MQ=255)
                         gCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCa                                                                                                                    <  8:132535/149‑1 (MQ=255)
                          cccGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCACCCTCATGTACCAAACAt                                                                                                                   >  2:140573/1‑149 (MQ=255)
                                cTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGt                                                                                                             <  3:2305/149‑1 (MQ=255)
                                      gAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTAc                                                                                                                          >  2:359721/1‑130 (MQ=255)
                                      gAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTAc                                                                                                                          <  1:359721/130‑1 (MQ=255)
                                      gAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGc                                                                                                       <  2:52584/149‑1 (MQ=255)
                                        gCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTc                                                                                                     <  5:326354/149‑1 (MQ=255)
                                          cAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCAt                                                                                                   <  2:309952/149‑1 (MQ=255)
                                           aaGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATg                                                                                                  >  7:72638/1‑149 (MQ=255)
                                           aaGCGACGGCGTAGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATg                                                                                                  >  6:178597/1‑149 (MQ=255)
                                                 cGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGcct                                                                                            >  3:112299/1‑149 (MQ=255)
                                                  ggCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCATGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGcctc                                                                                           <  1:140573/149‑1 (MQ=255)
                                                   gCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTc                                                                                                                                    <  3:221077/107‑1 (MQ=255)
                                                   gCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTc                                                                                                                                    >  4:221077/1‑107 (MQ=255)
                                                      ttGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCctgc                                                                                       <  8:72638/149‑1 (MQ=255)
                                                         gcTTCGCCTTTGGACACATGGCAACCGGGGGCGGCAGGGACAGTGCCTTCGGAGGTGCGCCTGCACTTCCTGCAGTGATACCGGCCGCCGTCGTCGGCCGCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCctgctg                                                                                     <  6:31044/147‑1 (MQ=255)
                                                                cGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGt                                                                             <  3:265719/149‑1 (MQ=255)
                                                                      acacAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCa                                                                       <  5:178597/149‑1 (MQ=255)
                                                                          aGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCctgc                                                                                       <  5:371371/129‑1 (MQ=255)
                                                                          aGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCctgc                                                                                       >  6:371371/1‑129 (MQ=255)
                                                                          aGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTc                                                                   >  1:232875/1‑149 (MQ=255)
                                                                            ggCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCtt                                                                 <  2:64706/149‑1 (MQ=255)
                                                                             gCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCttt                                                                >  7:129557/1‑149 (MQ=255)
                                                                                  cGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGt                                                           >  3:146291/1‑149 (MQ=255)
                                                                                  cGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATCCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGt                                                           <  6:761/149‑1 (MQ=255)
                                                                                    tGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGt                                                           >  3:69384/1‑147 (MQ=255)
                                                                                       gCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGAt                                                                         >  6:45191/1‑130 (MQ=255)
                                                                                       gCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGAt                                                                         <  5:45191/130‑1 (MQ=255)
                                                                                        cGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAgcgg                                                     <  8:129557/149‑1 (MQ=255)
                                                                                            aGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGa                                                  >  2:177172/1‑148 (MQ=255)
                                                                                            aGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGa                                                  >  4:10763/1‑148 (MQ=255)
                                                                                            aGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGAt                                                 >  3:235080/1‑149 (MQ=255)
                                                                                            aGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGAt                                                 <  4:146291/149‑1 (MQ=255)
                                                                                             gggACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGAt                                                 >  6:65155/1‑148 (MQ=255)
                                                                                                       cTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCg                                      >  4:219281/1‑149 (MQ=255)
                                                                                                        ttCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGt                                                                    <  4:51780/118‑1 (MQ=255)
                                                                                                        ttCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGt                                                                    >  3:51780/1‑118 (MQ=255)
                                                                                                          cGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCtt                                   >  6:265783/1‑149 (MQ=255)
                                                                                                            tAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCg                                 >  3:199212/1‑149 (MQ=255)
                                                                                                             aGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGt                                >  6:70557/1‑149 (MQ=255)
                                                                                                                          cTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCt                   <  4:235080/149‑1 (MQ=255)
                                                                                                                           ttCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAggg                           >  3:214112/1‑140 (MQ=255)
                                                                                                                           ttCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAggg                           <  4:214112/140‑1 (MQ=255)
                                                                                                                           ttCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTg                  >  4:281532/1‑149 (MQ=255)
                                                                                                                             ccTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGt                 <  4:112299/148‑1 (MQ=255)
                                                                                                                              cTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGtt                <  5:65155/148‑1 (MQ=255)
                                                                                                                              cTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCCGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTg               >  7:132670/1‑149 (MQ=255)
                                                                                                                                 cAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGc              <  5:70557/147‑1 (MQ=255)
                                                                                                                                 cAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGc              <  4:199212/147‑1 (MQ=255)
                                                                                                                                 cAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGc              <  2:232875/147‑1 (MQ=255)
                                                                                                                                  aGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGCCGa           >  5:334618/1‑149 (MQ=255)
                                                                                                                                         gaGGCCGACGACGGCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGt                                                                    <  3:65177/84‑1 (MQ=255)
                                                                                                                                         gaGGCCGACGACGGCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGt                                                                    >  4:65177/2‑85 (MQ=255)
                                                                                                                                         cAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGTTCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGCCGATCAGGc     <  1:252727/148‑1 (MQ=255)
                                                                                                                                         cAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCCGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGCCGATCAGGc     <  8:132670/148‑1 (MQ=255)
                                                                                                                                          aGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGCCGATCAGGCgg   <  3:10763/149‑1 (MQ=255)
                                                                                                                                          aGGCCGACGACGGCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAgcgg                                                     <  5:43632/99‑1 (MQ=255)
                                                                                                                                          aGGCCGACGACGGCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAgcgg                                                     >  6:43632/1‑99 (MQ=255)
                                                                                                                                           ggCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGCCGATCAGGCGGa  >  7:19517/1‑149 (MQ=255)
                                                                                                                                            gccgccGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCa                                                                       <  7:46797/79‑1 (MQ=255)
                                                                                                                                            gccgccGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCa                                                                       >  8:46797/1‑79 (MQ=255)
                                                                                                                                                   |                                                                                                                                            
ACGGCTTCCAGCCGAGTGCGGTACAGCCCGGCCTGGCCGAGCCAAGCGACGGCGTTGTCTTCGGCGTTGGACACAGGGCAACCGTGGGCGTCAGGGACAGTGCCTTCGTAGGTGCGCCTGCACTTCCTGCAGTGATACAGGCCGCCGTCGTCGGCCTCGCTCATGTACCAATCATGGCGGTGCATGCTCATGCGGCCTCCTGCTGGTACAGGTCGATCAGGTCTTTCGCGTTAGCGGCGATCAAGTCTTCCGCTTCGTCAGGGCAAACGCTGTTGCCGATCAGGCGGA  >  NC_002947/3415224‑3415511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑