| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,436,200 | G→A | 7.4% | L45L (CTG→CTA) ‡ | gpI → | tail formation protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,436,200 | 0 | G | A | 7.4% | 200.6 / 3.5 | 67 | L45L (CTG→CTA) ‡ | gpI | tail formation protein |
| Reads supporting (aligned to +/- strand): ref base G (31/31); new base A (2/3); total (33/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
GAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCGGGTCAACGCG > NC_002947/3436054‑3436347 | gAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCtggctggc > 8:321022/1‑149 (MQ=255)gAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCtggctggc > 3:30684/1‑149 (MQ=255) tgAAATGAGCCTGTTACCGCACAACGCCACCCATTTGGAGCGCGCCCTGGAGGCGGCCGCCGTCCTTGGCCTTTACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGTCCCGCCGAACTTCC‑TGCCCAGGCCAGCCAGGGCa < 1:229480/149‑1 (MQ=255) aCATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATgg < 7:321022/149‑1 (MQ=255) aCATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATgg < 2:80552/149‑1 (MQ=255) gAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAg < 1:334050/148‑1 (MQ=255) ggtACCGCACAACGCCACCCAGTGGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGCCCCGGACATTAGCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAgg < 1:182392/147‑1 (MQ=255) ttACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAggg > 6:189796/1‑149 (MQ=255) aCCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCt > 7:327920/1‑149 (MQ=255) aCCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCt > 2:269261/1‑149 (MQ=255) ccGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTg > 6:181116/1‑149 (MQ=255) ccGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTg < 2:184178/149‑1 (MQ=255) cacaACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTggg > 5:211678/1‑127 (MQ=255) cacaACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTggg < 6:211678/127‑1 (MQ=255) cGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGTCATGGAAGGTCGAGGGCTGGGAggcgg > 6:93603/1‑149 (MQ=255) cGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAggcgg < 3:247645/149‑1 (MQ=255) gCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAggcggc < 7:93351/149‑1 (MQ=255) gCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAggcggc > 5:346036/1‑149 (MQ=255) aCCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTa > 7:240956/1‑149 (MQ=255) ccAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGTGCTGGGAGGCGGCTTaca > 8:235029/1‑149 (MQ=255) cAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAggg > 2:213787/1‑131 (MQ=255) cAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAggg < 1:213787/131‑1 (MQ=255) gcgcCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAg > 1:339101/1‑149 (MQ=255) gcgcCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAg > 5:185657/1‑149 (MQ=255) ggcCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTgg > 3:105558/1‑91 (MQ=255) ggcCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTgg < 4:105558/91‑1 (MQ=255) cgccgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATcc > 1:192239/1‑149 (MQ=255) cgccgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTAACACCGACGACCAGCGCCGCGCGCTGATcc > 2:283236/1‑149 (MQ=255) gccgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCcg > 4:347440/1‑149 (MQ=255) gACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCcgc > 5:160145/1‑147 (MQ=255) ccTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGACCTTCCATGCCCAGGCCAGCCAGGGCA‑GGAAGTTCggcg < 2:106397/92‑4 (MQ=17) ccTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGACCTTCCATGCCCAGGCCAGCCAGGGCA‑GGAAGTTCggcg > 1:106397/1‑89 (MQ=17) ccTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTc > 1:126526/1‑149 (MQ=255) cTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTcc < 6:346036/149‑1 (MQ=255) cccGGATAATGTCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGtt > 1:83437/1‑148 (MQ=255) ccGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTca < 5:181116/149‑1 (MQ=255) ccGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCCACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTca > 3:240550/1‑149 (MQ=255) cGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTcac < 3:165315/149‑1 (MQ=255) ggACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTCGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTcac > 7:3783/1‑148 (MQ=255) gACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACaa < 5:189796/149‑1 (MQ=255) gACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCACGCGCTGATCCGCGAGGCCATTCCGGTTcac > 6:212971/1‑147 (MQ=255) cGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAgg < 3:347440/148‑1 (MQ=255) cGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAgg < 8:240956/148‑1 (MQ=255) ggggCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGACTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAggg > 4:287458/1‑148 (MQ=255) gggCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCa < 6:211347/149‑1 (MQ=255) gCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCg < 2:339101/148‑1 (MQ=255) gCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCGTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCgg < 4:30684/149‑1 (MQ=255) cGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGTCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGgcg < 5:93603/149‑1 (MQ=255) cGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGgcg > 4:167404/1‑149 (MQ=255) cGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGgcg > 5:44564/1‑149 (MQ=255) gACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTca > 1:170596/1‑125 (MQ=255) gACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTca < 2:170596/125‑1 (MQ=255) gACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGgcgc < 2:126526/149‑1 (MQ=255) tCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACcga < 4:151277/77‑1 (MQ=255) tCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACcga > 3:151277/1‑77 (MQ=255) aCGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTcggc < 2:192239/149‑1 (MQ=255) gCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGgcg > 2:128265/1‑138 (MQ=255) gCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTcggcgg < 6:160145/149‑1 (MQ=255) gCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTcggcgg > 4:5491/1‑149 (MQ=255) gCTG‑CCCGCCGAACTTCC‑TGCCCTGACTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTcggcgg < 3:287458/149‑1 (MQ=255) gAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCTGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAgg < 1:269261/149‑1 (MQ=255) gAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAgg < 8:327920/149‑1 (MQ=255) ttCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGGGCGATTCGGCGGGTg > 3:238205/1‑138 (MQ=255) ttCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGGGCGATTCGGCGGGTg < 4:238205/138‑1 (MQ=255) ccatGCCCAGGCCAGCCAGGGCA‑GGAAGTTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCgcgcgc < 6:185954/71‑1 (MQ=18) ccatGCCCAGGCCAGCCAGGGCA‑GGAAGTTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCgcgcgc > 5:185954/4‑74 (MQ=18) tGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCgc > 5:117469/1‑148 (MQ=255) cccTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCgg < 2:83437/147‑1 (MQ=255) cccTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCgg < 7:235029/147‑1 (MQ=255) tggcCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGAGTCGGCGGGTGCTCAAGGCGGTTCGGGTCAAcgcg > 2:315048/1‑149 (MQ=255) | GAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTG‑CCCGCCGAACTTCC‑TGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCGGGTCAACGCG > NC_002947/3436054‑3436347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |