Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,488,612 C→T 8.7% D40N (GAC→AAC) ‡ PP_3094 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,488,6120CT 8.7% 196.2 / 6.3 69D40N (GAC→AAC) ‡PP_3094hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (34/29);  new base T (3/3);  total (37/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.96e-01

GGCATCGGTAGCCGCGAAGCGCTCGAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCGGGTACTGGTCAG  >  NC_002947/3488469‑3488757
                                                                                                                                                |                                                                                                                                                 
ggCATCGGTAGCCGCGAAGCGCTCGAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCgg                                                                                                                                                 <  7:334666/146‑1 (MQ=255)
 gCATCGGTAGCCGCGAAGCGCTCGAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGgccgc                                                                                                                                             >  7:112533/1‑149 (MQ=255)
  cATCGGTAGCCGCGAAGCGCTCGAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGgccgcc                                                                                                                                            >  7:71632/1‑149 (MQ=255)
  cATAGGTAGCCGCGAAGCGCTCGAGGTCGGTCAGCTGATAGACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGgccgcc                                                                                                                                            <  8:184286/149‑1 (MQ=255)
        tAGCCGCGAAGCGCTCGAGGTCGGTCAGCTGATATACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTg                                                                                                                                      >  7:13043/1‑149 (MQ=255)
             gcgAAGCGCTCGAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTTGGCCGCCCAGCTGTCTTc                                                                                                                                 >  1:35029/1‑149 (MQ=255)
                    gcTCGAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATgcgc                                                                                                                          <  3:303845/149‑1 (MQ=255)
                     cTCGAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCt                                                                                                                         >  2:265589/1‑149 (MQ=255)
                        gAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCtt                                                                                                                        <  2:256577/147‑1 (MQ=255)
                           gtcggtcAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGc                                                                                                                                        >  4:282687/1‑128 (MQ=255)
                           gtcggtcAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGc                                                                                                                                        <  3:282687/128‑1 (MQ=255)
                               gtcAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTGCTCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATAc                                                                                                                <  1:265589/149‑1 (MQ=255)
                                  aGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCAt                                                                                                                              >  4:132816/1‑131 (MQ=255)
                                   gCTGATACACGCGCATCATCACCGACATCTGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTT‑TCGGCCAGCATGTCGGCCTCCCAGCTGTCTTCCATGCGCTTGCCGATAcggtc                                                                                                            <  8:71632/148‑1 (MQ=255)
                                   gCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATAcggtcg                                                                                                           <  7:11374/149‑1 (MQ=255)
                                          cacGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGAcc                                                                                                     <  7:339406/148‑1 (MQ=255)
                                             gcgcATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCg                                                                                                  >  4:149033/1‑148 (MQ=255)
                                                  tCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGcc                                                                                                                     >  4:36738/1‑124 (MQ=255)
                                                       accGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAg                                                                                       <  6:26819/149‑1 (MQ=255)
                                                                  cTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGAGCTTTTCGCTG‑TCGGCCAGCAAGACGGCCGCCCAGCAGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGc                                                                             >  4:247416/1‑148 (MQ=255)
                                                                      cccTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTTGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAggc                                                                        <  2:35029/149‑1 (MQ=255)
                                                                       ccTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAggcg                                                                       >  1:81526/1‑149 (MQ=255)
                                                                           ggCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTg                                                                   >  8:131675/1‑149 (MQ=255)
                                                                            gCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGc                                                                  >  4:214585/1‑149 (MQ=255)
                                                                              gTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCgg                                                                <  8:122369/149‑1 (MQ=255)
                                                                                 ggggTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGt                                                               >  6:174508/1‑147 (MQ=255)
                                                                                 ggggTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCa                                                             <  3:214585/149‑1 (MQ=255)
                                                                                  gggTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAg                                                            >  7:337574/1‑149 (MQ=255)
                                                                                    gTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGc                                                          <  7:242285/149‑1 (MQ=255)
                                                                                    gTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGc                                                          >  6:138214/1‑149 (MQ=255)
                                                                                        aGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCAt                                                                                                                              <  6:348594/77‑1 (MQ=255)
                                                                                        aGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCAt                                                                                                                              >  5:348594/1‑77 (MQ=255)
                                                                                        aGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGttt                                                      >  3:141827/1‑149 (MQ=255)
                                                                                         gCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTg                                                     <  7:131675/149‑1 (MQ=255)
                                                                                          cTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGttt                                                      >  7:78666/1‑147 (MQ=255)
                                                                                          cTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGa                                                    <  3:149033/149‑1 (MQ=255)
                                                                                             gTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAg                                                   <  5:48128/147‑1 (MQ=255)
                                                                                             gTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGa                                                 >  8:184517/1‑149 (MQ=255)
                                                                                             gTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGa                                                 >  4:124760/1‑149 (MQ=255)
                                                                                                  cgccgTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGttt                                                      >  7:19152/1‑139 (MQ=255)
                                                                                                  cgccgTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGttt                                                      <  8:19152/139‑1 (MQ=255)
                                                                                                     cgTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGc                                         <  5:48720/149‑1 (MQ=255)
                                                                                                     cgTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGc                                         <  8:112533/149‑1 (MQ=255)
                                                                                                      gTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCt                                        >  1:353493/1‑149 (MQ=255)
                                                                                                          gAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGa                                                    >  4:142938/1‑133 (MQ=255)
                                                                                                          gAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGa                                                    <  3:142938/133‑1 (MQ=255)
                                                                                                                  gATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGa                            >  7:240172/1‑149 (MQ=255)
                                                                                                                   aTGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGAc                           >  5:240627/1‑149 (MQ=255)
                                                                                                                      aCCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACgg                         >  8:109359/1‑148 (MQ=255)
                                                                                                                        cTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGa                                                    <  1:299216/119‑1 (MQ=255)
                                                                                                                        cTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGa                                                    >  2:299216/1‑119 (MQ=255)
                                                                                                                        cTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCa                       >  6:86266/1‑148 (MQ=255)
                                                                                                                        cTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCa                       >  2:40814/1‑148 (MQ=255)
                                                                                                                              gCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTc                >  3:287676/1‑149 (MQ=255)
                                                                                                                               cTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTcc               <  7:184517/149‑1 (MQ=255)
                                                                                                                                tG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCg              >  3:117622/1‑149 (MQ=255)
                                                                                                                                   tCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCggg            <  5:138214/149‑1 (MQ=255)
                                                                                                                                   gcGGCCGACATGCTGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTg                                 >  6:28125/2‑128 (MQ=255)
                                                                                                                                   gcGGCCGACATGCTGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTg                                 <  5:28125/127‑1 (MQ=255)
                                                                                                                                   gcGGCCGACATGCTGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAAGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTg                                 >  2:77388/2‑128 (MQ=255)
                                                                                                                                   gcGGCCGACATGCTGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAAGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTg                                 <  1:77388/127‑1 (MQ=255)
                                                                                                                                     ggCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCtt                                       <  3:134836/120‑1 (MQ=255)
                                                                                                                                     ggCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCtt                                       >  4:134836/1‑120 (MQ=255)
                                                                                                                                      gCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATAAGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCGGGTAc         >  8:339098/1‑149 (MQ=255)
                                                                                                                                          gCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTGGGCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGACGACGATTTGCTTGTGTTGCATGACGGCAAAACCTCCGGGTACTGGt     <  5:370231/149‑1 (MQ=255)
                                                                                                                                             tGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCGGGTACTGGTcag  <  5:86266/149‑1 (MQ=255)
                                                                                                                                             tGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCGGGTACTGGTcag  <  5:174508/149‑1 (MQ=255)
                                                                                                                                              gTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCGGGTACTGGTc    >  7:13330/1‑146 (MQ=255)
                                                                                                                                              gTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCGGGTACTGGTc    <  8:13330/146‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                 
GGCATCGGTAGCCGCGAAGCGCTCGAGGTCGGTCAGCTGATACACGCGCATCACCACCGACAGCGGCTTGCCCTCGGCGTCGGGGTTGAGCTGGTTGCCGCCGTCGGAGGTCAGGATGACCTTTTCGCTG‑TCGGCCAGCATGTCGGCCGCCCAGCTGTCTTCCATGCGCTTGCCGATACGGTCGGTGACCCCGCAGCCGGCCAGCGCTACCAGCAAGGCGGCTGCGGTCAGGCGTTTGAGGACGATGTGCTTGTGTTGCATGACGGCAAAACCTCCGGGTACTGGTCAG  >  NC_002947/3488469‑3488757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑