| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 284,587 | T→A | 13.0% | intergenic (+34/+29) | betT‑II → / ← atsK | choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 284,587 | 0 | T | A | 13.0% | 157.1 / 14.9 | 72 | intergenic (+34/+29) | betT‑II/atsK | choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (31/31); new base A (5/4); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-02 | |||||||||||
CCTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCC > NC_002947/284439‑284733 | ccTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCtt < 1:207198/149‑1 (MQ=255) aGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGccc < 2:108998/149‑1 (MQ=255) aGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGc < 1:12702/147‑1 (MQ=255) gCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCcg < 5:10657/149‑1 (MQ=255) aGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCAAGCCCGCGaa < 7:15986/149‑1 (MQ=255) ggCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAag < 3:322185/149‑1 (MQ=255) gCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGaa > 5:341302/1‑147 (MQ=255) gCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCAAGCCCGCGAaga < 2:106298/149‑1 (MQ=255) aGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAgg < 7:40729/149‑1 (MQ=255) gCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGc < 4:152531/149‑1 (MQ=255) ccAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGc > 6:217605/1‑148 (MQ=255) aGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGc > 8:254676/1‑146 (MQ=255) aaCTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGa > 3:292438/1‑148 (MQ=255) tGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGc > 3:26746/1‑148 (MQ=255) tggtggGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGACACATGCAGTACCTGCACCTGGTAAGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGACCGCGAAGAGGCCAGACAGGC‑agatct > 7:53630/1‑144 (MQ=255) gCTACAGCACGTAGCAGATCATCACCGCCATCCTCTACCAGTCCGAGCGCCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGCCGTC‑TTCGCGGGCTTGCCCGCGAAGTGGCCAGACAGGC‑AACCGCTAGaaa < 4:26746/149‑1 (MQ=255) cTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAg < 1:268959/149‑1 (MQ=255) cTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAg > 4:24424/1‑149 (MQ=255) cTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAg > 2:241226/1‑149 (MQ=255) cTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCAAGCCCGCGaa > 4:284319/1‑122 (MQ=255) cTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCAAGCCCGCGaa < 3:284319/122‑1 (MQ=255) aGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑ATCGCGGGCTTGCCCGCGAAGACGCCACACAGGC‑AACCGCAAGAAACGTg > 4:239796/1‑148 (MQ=255) aatgAGCAGATCATCTACGAGATCCTCGACCAGTACGAGCGCCACATGCAGTACCTGGACCTGGTCCGGTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATc < 7:273061/146‑1 (MQ=39) catcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATgg < 3:24424/149‑1 (MQ=255) atcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGt < 7:296373/132‑1 (MQ=255) atcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGt > 8:296373/1‑132 (MQ=255) atcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATgg < 1:241226/148‑1 (MQ=255) aCGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAg > 3:237541/1‑126 (MQ=255) cGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGccc > 3:40432/1‑149 (MQ=255) gACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCg > 2:206508/1‑149 (MQ=255) cATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGt < 7:254676/149‑1 (MQ=255) tCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAACGTGCATCCCCAAGGATGGTCGCCCGGTGCAt > 1:150996/1‑148 (MQ=255) cAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACccg > 3:84798/1‑149 (MQ=255) aGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACccgc < 4:292438/149‑1 (MQ=255) tACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACccgccg < 5:217605/149‑1 (MQ=255) gAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGtt > 4:240589/1‑149 (MQ=255) gCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCATACGCGGGCTTGCCCGCCAAGAGGCCA‑ACAAGCAAACCGCTAGAAAGGGGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggt > 1:93217/1‑149 (MQ=255) gCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtc > 4:291542/1‑149 (MQ=255) gCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtc > 4:304464/1‑149 (MQ=255) tACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAatcatc < 1:206508/149‑1 (MQ=255) gagcttGGTCAGCGGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcg < 7:69414/126‑1 (MQ=255) gCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGt < 8:341463/88‑1 (MQ=255) gCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGt > 7:341463/1‑88 (MQ=255) gCACCTGGTCCACTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcgg > 5:147170/1‑136 (MQ=255) gCACCTGGTCCACTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcgg < 6:147170/136‑1 (MQ=255) gTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCaaaa < 6:341302/147‑1 (MQ=255) tCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCAc < 1:189028/139‑1 (MQ=255) tCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCAc > 2:189028/1‑139 (MQ=255) cGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTg > 6:125284/1‑149 (MQ=255) cGCTGACCAAGCTCTCCTCTCCTGCCCTC‑TTCGCTGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCt < 3:239796/148‑1 (MQ=255) gCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTgg < 4:40432/149‑1 (MQ=255) aCCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCa > 8:270666/1‑149 (MQ=255) cAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCAcg > 8:253781/1‑149 (MQ=255) ctgtcctgGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTcc > 3:251466/1‑149 (MQ=255) tcctgGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCa > 6:270907/1‑117 (MQ=255) tcctgGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCa < 5:270907/117‑1 (MQ=255) tcctgGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCa < 7:253781/148‑1 (MQ=255) tcctgGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAg < 5:125284/149‑1 (MQ=255) tctgGCCTA‑TTCGCGGGAACGCCGGGTAATTGGCCAGGCAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCa < 7:117518/146‑1 (MQ=255) cctgGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTc > 2:268340/1‑133 (MQ=255) cctgGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTc < 1:268340/133‑1 (MQ=255) ctgGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGaa < 2:293314/149‑1 (MQ=255) ctc‑tTCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCa > 7:334799/1‑149 (MQ=255) tc‑tTCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc > 4:199168/1‑149 (MQ=255) tc‑tTCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc > 4:50208/1‑149 (MQ=255) cctccgcgcgCATCCCCTCTAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCAGCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc < 8:140166/145‑1 (MQ=255) cgcgGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTc < 3:304464/148‑1 (MQ=255) cgcgGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCa > 5:127406/1‑149 (MQ=255) cgcgGGCAAGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGtt < 3:94929/130‑1 (MQ=255) cgcgGGCAAGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGtt > 4:94929/1‑130 (MQ=255) cgGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCAtt < 4:84798/149‑1 (MQ=255) gCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCCAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATtctc > 2:123756/1‑149 (MQ=255) cTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTcc > 7:97071/1‑149 (MQ=255) | CCTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTC‑TTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGC‑AACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCC > NC_002947/284439‑284733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |