| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,045,934 | C→A | 8.0% | Q262H (CAG→CAT) ‡ | PP_3567 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,045,934 | 0 | C | A | 8.0% | 214.3 / 7.8 | 75 | Q262H (CAG→CAT) ‡ | PP_3567 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (37/31); new base A (3/3); total (41/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.68e-01 | |||||||||||
TGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCA > NC_002947/4045798‑4046082 | tGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCggg < 5:26574/148‑1 (MQ=255) cgcAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGc > 6:80068/1‑149 (MQ=255) cAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTg > 2:249851/1‑149 (MQ=255) aaCACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGc < 1:249851/149‑1 (MQ=255) tAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGc > 8:31321/1‑123 (MQ=255) tAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGc < 7:31321/123‑1 (MQ=255) tAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATTTTCGCTGCAGgcg > 7:120092/1‑149 (MQ=255) tAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGgcg > 4:212485/1‑149 (MQ=255) gTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGcc > 6:86561/1‑149 (MQ=255) aCCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGTGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCt < 7:332596/148‑1 (MQ=255) aCCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTg > 4:275896/1‑149 (MQ=255) tATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAaca > 4:8589/1‑149 (MQ=255) tGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAAcaca > 7:217068/1‑149 (MQ=255) tGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCAGGCCAGTcctggc > 4:11566/1‑115 (MQ=255) tGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCAGGCCAGTcctggc < 3:11566/120‑6 (MQ=255) tGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGCCCTGCCAGTCGGGCAATATACGCTGCAGGTGCCCTGCCAacac > 8:31423/1‑148 (MQ=255) aGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCt > 7:308549/1‑138 (MQ=255) aGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCt < 8:308549/138‑1 (MQ=255) aGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACAt < 1:91661/148‑1 (MQ=255) aGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATc > 4:294007/1‑149 (MQ=255) aaaaTTTTCGCAAAAGTCGATGAATGCGTTTACACGCCGTGAG‑CCCCGGTCGTTGGGCATATACAGGGCGTTGATTCTGCTATTGGCTGCGCCAGGACTGGCCTGCCACTCGGGGAAAATTCGCTCCAGGAGCGCTGCCAACACATcca > 4:317348/2‑148 (MQ=255) aTTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGa < 3:340324/113‑1 (MQ=255) aTTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGa > 4:340324/1‑113 (MQ=255) gCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAcc < 5:86561/148‑1 (MQ=255) gCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCAGGCCAGTcctg < 4:299373/105‑4 (MQ=255) gCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCAGGCCAGTcctg > 3:299373/1‑102 (MQ=255) aaaaGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagc > 6:340348/1‑149 (MQ=255) aaaaGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagc < 3:212485/149‑1 (MQ=255) aaaaGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagc < 8:30174/149‑1 (MQ=255) aaaaGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGATGCGCCAGGACTGGCCTGCAAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCACGACATCCTCGCGTAccagc > 3:3799/1‑149 (MQ=255) atgTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGTGCCCTGCCAACACATCCTCGCGTAccagcca < 7:31423/147‑1 (MQ=255) gATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCg < 1:142752/148‑1 (MQ=255) aTGAATGCGTTTACCCGCCGTGAGTCCCCGGTGGTTGGGCATATACAGGGCGTTGATGATGCTATTGGCTGCGCCAGGACTGGCGTGCCAGTCGGGGATTATTCGATGCAGGCGCCGTGCCAACACATCATCGCGTACCAGCCAGTCgg > 7:52182/1‑149 (MQ=255) aTGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAac < 1:295070/123‑1 (MQ=255) aTGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAac > 2:295070/1‑123 (MQ=255) gTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTg > 1:110104/1‑149 (MQ=255) gTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTg > 1:190107/1‑149 (MQ=255) cccGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGAt < 5:80068/148‑1 (MQ=255) ccgccgTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagc > 5:199339/1‑127 (MQ=255) ccgccgTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTAccagc < 6:199339/127‑1 (MQ=255) gTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActg < 2:227144/149‑1 (MQ=255) cccGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcctgc > 7:293757/1‑148 (MQ=255) ccGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcctgc < 4:319030/147‑1 (MQ=255) ccGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcctgc > 7:151263/1‑147 (MQ=255) ccGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCActgcctgc > 3:319030/1‑147 (MQ=255) acggcggTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCa < 5:279607/148‑1 (MQ=255) cGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAg > 1:327526/1‑149 (MQ=255) gtTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCg > 7:212874/1‑149 (MQ=255) gtTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCg > 6:7371/1‑149 (MQ=255) gtTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTACCg > 6:307729/1‑149 (MQ=255) tGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGtt > 5:270055/1‑149 (MQ=255) gggCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGttt > 4:129896/1‑149 (MQ=255) ggCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTc < 3:294007/149‑1 (MQ=255) gCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCa < 8:212874/149‑1 (MQ=255) gCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCa < 3:317348/149‑1 (MQ=255) cATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCAc < 2:110104/149‑1 (MQ=255) atatACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACg > 3:271909/1‑149 (MQ=255) taCAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCaa > 4:345531/1‑149 (MQ=255) cGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCg < 3:8589/149‑1 (MQ=255) gctgctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTg < 8:151263/148‑1 (MQ=255) ctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGgcg < 8:217068/147‑1 (MQ=255) ctATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCt < 1:23445/149‑1 (MQ=255) tATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTg > 2:147009/1‑149 (MQ=255) tGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGc < 1:181468/81‑1 (MQ=255) tGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGc > 2:181468/1‑81 (MQ=255) cgcCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGc < 6:270055/149‑1 (MQ=255) cccgACTGGCAGGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGc < 5:213385/143‑1 (MQ=255) cccgACTGGCAGGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGc > 6:213385/4‑146 (MQ=255) cAGGACTGGCCTGCCAGTCGGTGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTAGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCATTGCCGTTTCACTCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCa < 8:293757/149‑1 (MQ=255) cAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTg < 6:38568/144‑1 (MQ=255) cAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTg > 5:38568/1‑144 (MQ=255) cAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCa > 6:30246/1‑149 (MQ=255) cAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCa > 6:280958/1‑149 (MQ=255) aCTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGc > 8:105100/1‑142 (MQ=255) aCTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGc < 7:105100/142‑1 (MQ=255) gacTGCGAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAAGACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGt < 8:120092/146‑1 (MQ=255) cTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCa < 3:345531/149‑1 (MQ=255) | TGCGCACTGCGCAACACTAGTGACCGTGTATGAGCAAATTTTCGCAAAAGTCGATGAATGCGTTTACCCGCCGTGAG‑CCCCGGTGGTTGGGCATATACAGGGCGTTGATGCTGCTATTGGCTGCGCCAGGACTGGCCTGCCAGTCGGGGAATATTCGCTGCAGGCGCCCTGCCAACACATCCTCGCGTACCAGCCAGTCGGCCAGCAGTGCGATACCACTGCCTGCCAGTGCCGTTTCACGCAACATGTCGGCATTGGCGCTGCGCAGTGGCCCACTTACGTCCA > NC_002947/4045798‑4046082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |