| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,240,031 | A→C | 5.9% | Y87D (TAC→GAC) ‡ | PP_3717 ← | LuxR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,240,031 | 0 | A | C | 5.9% | 212.4 / 4.3 | 68 | Y87D (TAC→GAC) ‡ | PP_3717 | LuxR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (29/35); new base C (2/2); total (31/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.97e-01 | |||||||||||
AGTTGTCGGGGGCGATTTCCTGCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGC > NC_002947/4239884‑4240179 | agTTGTCGGGGGCGATTTCCTGCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTAc < 7:263980/149‑1 (MQ=255) gggCGATTTCCTGCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTgc > 5:246527/1‑149 (MQ=255) ccTGCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCAGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCAGGTACAGCAACTGCGGcgcccgc > 2:105670/1‑149 (MQ=255) cTGCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGc < 8:265477/133‑1 (MQ=255) cTGCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGc > 7:265477/1‑133 (MQ=255) cTGCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGcgcccgc < 3:385/148‑1 (MQ=255) gCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGTACCAGCaaggcat < 3:48290/138‑6 (MQ=255) gCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGTACCAGCaaggcat > 4:48290/1‑133 (MQ=255) ggtggtAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTgg < 4:109483/149‑1 (MQ=255) gtggtAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTgg > 7:165450/1‑148 (MQ=255) gtggtAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTgg < 8:165450/148‑1 (MQ=255) gtgctAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGc < 4:108504/149‑1 (MQ=255) ggtAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCAc > 2:352173/1‑149 (MQ=255) aGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTc > 7:141121/1‑148 (MQ=255) gAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGTAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCaa < 5:341015/149‑1 (MQ=255) aaGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAg < 2:283872/149‑1 (MQ=255) ggCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGatc > 6:99394/1‑148 (MQ=255) gCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGTACCAGCaag < 7:200390/114‑2 (MQ=255) gCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGTACCAGCaag > 8:200390/1‑113 (MQ=255) cAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTg < 5:201194/142‑1 (MQ=255) cAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTg > 6:201194/1‑142 (MQ=255) aGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGatcatcat > 3:221830/1‑149 (MQ=255) ggCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGatcatcatc < 6:51318/149‑1 (MQ=255) cGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGAc > 5:158402/1‑149 (MQ=255) gCTTTGGACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGatca < 7:251295/140‑1 (MQ=255) gCTTTGGACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCCCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGatca > 8:251295/1‑140 (MQ=255) cTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTc < 3:63107/149‑1 (MQ=255) tGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTcc < 8:141121/147‑1 (MQ=255) ggCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCa > 5:256404/1‑149 (MQ=255) gCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCAc < 6:256404/149‑1 (MQ=255) cAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCAc > 7:265560/1‑148 (MQ=255) gCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACt > 5:171891/1‑149 (MQ=255) aGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCa < 2:36499/109‑1 (MQ=255) aGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCa > 1:36499/1‑109 (MQ=255) gAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGc < 6:158402/149‑1 (MQ=255) aaaGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGTCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGcc > 5:2507/1‑149 (MQ=255) aaaGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGcc > 6:201133/1‑149 (MQ=255) aaaGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGcc < 5:201133/149‑1 (MQ=255) aaGGGTCCAGCAGGTAGCCGGCGCGGAACTAGCGCTCCCGCACCGCGGCCCGATGCAGTTCGGGGATGCCTTGCTGTTACAGCAACTGCGGCGCCCGCCCCTGGCACTCACGGCTGAGCATCATCGACTCCACCTGCACCAACTGGCCg < 8:99890/149‑1 (MQ=255) ggTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATg < 1:352173/149‑1 (MQ=255) ggccAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATGATCATCGACTCCACCTGCACCAACTGGCCGATgg < 6:85120/147‑1 (MQ=255) agGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGc < 8:280841/149‑1 (MQ=255) agGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCGGAGCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGc < 4:297770/149‑1 (MQ=255) gCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACAt < 4:221830/149‑1 (MQ=255) ggCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACt < 2:183386/149‑1 (MQ=255) gcTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAg > 7:162656/1‑90 (MQ=255) gcTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAg < 8:162656/90‑1 (MQ=255) gcTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTc > 1:330052/1‑147 (MQ=255) aaaTAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAgcg < 6:171891/148‑1 (MQ=255) aaaTAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAgc < 6:246527/147‑1 (MQ=255) aaaaGCGCTCCAGCACCGCGGCCCGAAGCCGTTAGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCAAATACTCCAgcgc > 8:298192/4‑148 (MQ=255) cgcTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCggg < 8:265560/149‑1 (MQ=255) cTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCCACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCggggg > 7:233373/1‑149 (MQ=255) cTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATgg > 3:296527/1‑119 (MQ=255) cTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATgg < 4:296527/119‑1 (MQ=255) aGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATgg > 2:231781/1‑115 (MQ=255) aGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATgg < 1:231781/115‑1 (MQ=255) aGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTc < 5:99394/149‑1 (MQ=255) ccGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCa < 8:233373/149‑1 (MQ=255) ggggATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGCTGCCATCGGCcagttgg < 3:349024/106‑6 (MQ=255) ggggATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGCTGCCATCGGCcagttgg > 4:349024/1‑101 (MQ=255) ggggATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGc > 3:179651/1‑148 (MQ=255) gATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACg > 1:66172/1‑149 (MQ=255) cTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGcc < 7:89917/146‑1 (MQ=255) cTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGcc > 8:89917/1‑146 (MQ=255) ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCa < 3:341585/121‑1 (MQ=255) ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCa > 4:341585/1‑121 (MQ=255) gTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGCCTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGGTTCCCCATGGGCCAGGGCGCGCTGCAACGCCCCGTGCCAct > 2:315266/1‑149 (MQ=255) aCAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCa > 3:292830/1‑110 (MQ=255) aCAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCa < 4:292830/110‑1 (MQ=255) aCAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCActgc > 5:330751/1‑149 (MQ=255) | AGTTGTCGGGGGCGATTTCCTGCAGGTGGTAGAAGCCTTCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGC > NC_002947/4239884‑4240179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |