| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,827,054 | C→A | 7.8% | S1379I (AGT→ATT) ‡ | pvdL ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,827,054 | 0 | C | A | 7.8% | 203.3 / 6.6 | 66 | S1379I (AGT→ATT) ‡ | pvdL | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base C (31/29); new base A (2/3); total (34/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.23e-01 | |||||||||||
GTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGTGAC > NC_002947/4826906‑4827199 | gTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCAc < 7:119349/149‑1 (MQ=255) ccAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTg > 3:327079/1‑149 (MQ=255) aCGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGTACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCAAGTGCCTGcagta < 7:73377/148‑5 (MQ=255) gTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCt > 3:216864/1‑149 (MQ=255) gTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCt < 4:216864/149‑1 (MQ=255) gATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCAACTGCAGGCACTTGCCTGCGGCTCCTgg < 1:200483/148‑1 (MQ=255) aTGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGAc < 1:253411/149‑1 (MQ=255) ggCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACCGCAGGCAAGTGCCTGcagt < 3:193953/139‑4 (MQ=255) ggCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACCGCAGGCAAGTGCCTGcagt > 4:193953/1‑136 (MQ=255) gTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAacac < 6:62910/149‑1 (MQ=255) gTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACtt > 4:352979/1‑120 (MQ=255) gTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACtt < 3:352979/120‑1 (MQ=255) gTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCaa > 3:182463/1‑149 (MQ=255) tCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGACCACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCGTGGACGAACACCTGCaa > 6:53123/1‑148 (MQ=255) tCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAAc > 2:344007/1‑149 (MQ=255) gCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCAc > 4:205464/1‑113 (MQ=255) gCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCAc < 3:205464/113‑1 (MQ=255) ccATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGCAAAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAgcg < 1:94035/149‑1 (MQ=255) ggTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACCGCAGGCAAGTGCCTGcagta > 8:73097/1‑113 (MQ=255) ggTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACCGCAGGCAAGTGCCTGcagta < 7:73097/117‑5 (MQ=255) gtgCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGt > 6:69003/1‑149 (MQ=255) aGTTGCACCTGCGGCAGCACCTGCAGCACGAGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAg < 5:172610/149‑1 (MQ=255) gTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGc > 8:116037/1‑149 (MQ=255) cACCTGCGGCAGGACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGTACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTa < 5:80499/148‑1 (MQ=255) cACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTa < 3:198492/148‑1 (MQ=255) cACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTa < 1:344007/148‑1 (MQ=255) cACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAg > 6:298091/1‑149 (MQ=255) cACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAg > 8:13949/1‑149 (MQ=255) aCCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAgcgg > 2:198603/1‑128 (MQ=255) cGGCAGCACCTGCAGCAGGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCTCTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTTGTCAccc < 2:197142/149‑1 (MQ=255) cagcaCCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCa > 3:159731/1‑148 (MQ=255) gcaCCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCAt > 6:359665/1‑147 (MQ=255) aCCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGc > 8:58484/1‑149 (MQ=255) cTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCt < 8:98738/149‑1 (MQ=255) tGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTg > 1:345680/1‑149 (MQ=255) gcgGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAggg > 2:327536/1‑149 (MQ=255) ggTCACGCAGCGTGGCGGACAACGCTTCGCCCCCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAggg > 4:333875/1‑147 (MQ=255) tCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGc < 4:327079/149‑1 (MQ=255) aCGCAGCGTGTCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCg < 3:266843/148‑1 (MQ=255) aCGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGa < 7:116037/149‑1 (MQ=255) aCGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGa > 4:186354/1‑149 (MQ=255) aCGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGa > 6:241382/1‑149 (MQ=255) cGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGa > 5:98348/1‑148 (MQ=255) gCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCgg < 5:241382/149‑1 (MQ=255) gACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGcggcgg > 5:357211/1‑89 (MQ=255) gACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGcggcgg < 6:357211/89‑1 (MQ=255) gACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTc < 5:298091/149‑1 (MQ=255) aCAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTcg > 5:368919/1‑149 (MQ=255) cGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGAt < 6:98348/149‑1 (MQ=255) gCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCAc < 4:159731/149‑1 (MQ=255) gCCAACCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGCCTCCTGGACCAACACCTGCAACAGCCGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGCCAGCGATACGCTGCGGGTCGCGATGTTCAc > 4:110716/1‑149 (MQ=255) cccGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAgg > 3:258661/1‑149 (MQ=255) ccGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCAc > 5:84961/1‑144 (MQ=255) ccGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCAc < 6:84961/144‑1 (MQ=255) ccGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAggg > 4:69612/1‑149 (MQ=255) cGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGc < 2:345680/149‑1 (MQ=255) agaACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCg < 7:13949/149‑1 (MQ=255) agaACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCg < 7:58484/149‑1 (MQ=255) aaCACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGc < 4:182463/149‑1 (MQ=255) ccAGCGC‑AAGCTACTGCAGGCAGTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCa > 7:55016/1‑149 (MQ=255) ccAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAgcggcg > 8:73885/1‑62 (MQ=255) gc‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGc < 5:53123/149‑1 (MQ=255) aCTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCAcc > 2:179282/1‑123 (MQ=255) aCTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCAcc < 1:179282/123‑1 (MQ=255) cAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCgg < 5:69003/148‑1 (MQ=255) cAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGt > 2:107775/1‑149 (MQ=255) cAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGCCGAGCACCAGCTTGCAGCCg < 5:359665/147‑1 (MQ=255) gCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGTGAc > 4:240228/1‑149 (MQ=255) aCTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGTGAc > 1:194964/1‑147 (MQ=255) | GTGCCAGTGGGTGACGTTGATGGCGGTTTCAGTCGGGCCATACCGGTTGTGCAGTTGCACCTGCGGCAGCACCTGCAGCACGCGGTCACGCAGCGTGGCGGACAACGCTTCGCCACCCGAGAACACCCAGCGC‑AAGCTACTGCAGGCACTTGCCTGCGGCTCCTGGACGAACACCTGCAACAGCGGCGGTACAAAGTGCAGCGTAGTCACCCCATAAGCCTGCACCAGGGCAGCGATACGCTGCGGGTCGCGATGTTCACCAGGGCCGGCGAGCACCAGCTTGCAGCCGGTGAC > NC_002947/4826906‑4827199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |