Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	3,036,267	C→T	A48A (GCG→GCA)	PP_2648 ←	universal stress protein family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,036,267	0	C	T	100.0%	51.4 / NA	17	A48A (GCG→GCA)	PP_2648	universal stress protein family protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (8/9);  total (8/9)

AGCAGCGCTGCCAGTGCGTGGGTTTTCTCGCCTGCGCTATCCAGTACGCGTTTCAACAGATCGTCATCAGGCGTCACCAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGCGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCGGGTTCATGTGGGGCTCCTTGGTCAAGGCGCGCACAGCGATCAAGCGGTAAAC  >  NC_002947/3036124‑3036401                                                                                                                                                |                                                                                                                                       agcagcGCTGCCAGTGCGTGGGTTTTCTCGCCTGCGCTATCCAGTACGCGTTTCAACAGATCGTCATCAGGCGTCACCAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCAt                                                                                                                                    >  3:85507/1‑148 (MQ=255)                   tGGGTTTTCTCGCCTGCGCTATCCAGTACGCGTTTCAACAGATCGTCATCAGGCGTCACCAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCcgcgc                                                                                                                  >  2:98324/1‑148 (MQ=255)                        tttCTCGCCTGCGCTATCCAGTACGCGTTTCAACAGATCGTCATCAGGCGTCACCAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCa                                                                                                             <  6:56586/148‑1 (MQ=255)                                cTGCGCTATCCAGTACGCGTTTCAACAGATCGTCATCAGGCTTCACCAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGtt                                                                                                     <  4:61814/148‑1 (MQ=255)                                                gcggtgcAACAGATCGTCATCAGGCGTCACCAACTGTGTGAGGCGCTCGAAGGGTGCCGTGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGaa                                                                                     <  1:105728/142‑1 (MQ=255)                                                       aaCAGATCGTCATCAGGCGTCACCAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCgg                                                                              >  5:47239/1‑148 (MQ=255)                                                                  atcaGGCGTCACCAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGt                                                                   <  6:74591/148‑1 (MQ=255)                                                                              cAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGc                                                       >  7:6757/1‑148 (MQ=255)                                                                                aCTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCgg                                                     >  3:113024/1‑148 (MQ=255)                                                                                aCTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCgg                                                     >  3:110280/1‑148 (MQ=255)                                                                                aCTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCgg                                                     <  2:94651/148‑1 (MQ=255)                                                                                          gcgcTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCGGGTTCATGTgg                                           <  1:126774/148‑1 (MQ=255)                                                                                            gcTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCGGGTTCATGTgggg                                         >  5:144630/1‑148 (MQ=255)                                                                                                           ggTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGGAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGACAGGTCGGTGGCAACCAGTATGTGTTTCAGCGGGTTCATGTGGGGCTCCTTGGTCAAGgc                          <  2:170611/148‑1 (MQ=255)                                                                                                                    cGTAGAGCAGGTCCAGCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCGGGTTCATGTGGGGCTCCTTGGTCAAGGCGCGCACAGc                 <  4:102815/148‑1 (MQ=255)                                                                                                                         agCAGGTCCAGCGAGGCCTGGTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGACAGGTCGGTGGCAACCAGTATGTGTTTCAGCGGGTTCATGTGGGGCTCCTTGGTCAAGGCGCGCACAGCGATc             <  1:115162/147‑1 (MQ=255)                                                                                                                                   gCGAGGCCTGTTGTGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCGGGTTCATGTGGGGCTCCTTGGTCAAGGCGCGCACAGCGATCAAGCGGTAAAc  >  4:129201/1‑148 (MQ=255)                                                                                                                                                |                                                                                                                                       AGCAGCGCTGCCAGTGCGTGGGTTTTCTCGCCTGCGCTATCCAGTACGCGTTTCAACAGATCGTCATCAGGCGTCACCAACTGTTTGAGGCGCTCGAAGGGTGCCGGGTTGGCAACGTAGAGCAGGTCCAGCGAGGCCTGTTGCGCATCGCTCAGGTAGGCCGCGCGCTCAGCGGCGTTGCGAGCATGTGGGGAAAGGTCGGTGGCAACCAGTATGTGTTTCAGCGGGTTCATGTGGGGCTCCTTGGTCAAGGCGCGCACAGCGATCAAGCGGTAAAC  >  NC_002947/3036124‑3036401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑