Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	70.1 / NA	22	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (14/8);  total (14/8)

GGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013752‑6014027                                                                                                                                      |                                                                                                                                               gggTGAAGTCGCTTGACGGTGGTGTGGTCAGCTTCATCGAATAACCGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCaa                                                                                                                                  <  6:127700/148‑1 (MQ=255)          cgcgGGCAGGGGGGGTGGGCAGCTGCATCGAAAAACCGCGACACCTGCTGCGCGGGCACGCCCGCGCCCACCGGTGCAGCACAGGGCTCCACCGCTGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTAt                                                                                                                         <  7:67179/148‑1 (MQ=21)            cgggAAGGTGGGGGGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTTCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGTCGTGCCCGCGAATGGCCGCAACCCTTTTATCt                                                                                                                       <  4:48284/146‑1 (MQ=37)                                                       tGCTTCGCGGGCACGCCCGCTCCCCCAGGTGCCGCACAGGTCTCGAACGCTGTGCCGGACCTGTGGGAGCGGGCGGGGCCGGGAATGGCCGCAACCCGTTTATCTGGTTGCCGCCCGCCCCGCCACCAACAAGCGCGGGGAAAGttgt                                                                            >  7:51046/1‑146 (MQ=25)                                                       tGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGGACGCTGTGCCGTACCTGTGGGAGCGGGCGGGCCCGCGCATGGGCGCAACCCTTTTATCTGGGTGCCGCCCGCGCCGCCCCCACCCAGCGCGGGGAAAGttgt                                                                            >  7:53363/1‑146 (MQ=25)                                                          ggcgcgGGCACGCCCGCGCCCCCCGGGCCCGCACAGGTCCCGACCGCTGTGCCGAACCGGGGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttctt                                                                           <  1:62122/144‑1 (MQ=37)                                                                     gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCACCCCTTTTATCTGGTTGCCGCCAGCCCCGCCCCCAGCCAGCGCTGGTAAAGGTCTTCTTTAAGCCCCTg                                                              >  3:22657/1‑148 (MQ=38)                                                                      cccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                             <  4:23760/148‑1 (MQ=255)                                                                          cTCCCCCACGTGCAGCACAGGGCTCCACCGCTGTGCCGTACCTGTGGGCGCGGGCGGGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCACCAACAAGCTCTGGTAAAGTTCTTCTTTAAGCGCCTGCGGCt                                                         <  6:121879/148‑1 (MQ=255)                                                                           tCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTg                                                        >  3:5545/1‑148 (MQ=21)                                                                            cccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                       >  8:153655/1‑148 (MQ=255)                                                                             ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCACCCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcc                                                      >  5:62123/1‑148 (MQ=255)                                                                             ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcc                                                      >  2:100927/1‑148 (MQ=255)                                                                                            aGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGcc                                       >  2:92394/1‑148 (MQ=255)                                                                                            aGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGcc                                       >  2:89880/1‑148 (MQ=255)                                                                                                    aaCGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTgg                               >  2:146296/1‑148 (MQ=255)                                                                                                         tgtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGACAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTc                          <  8:46480/148‑1 (MQ=255)                                                                                                              cGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTc                          >  2:179811/1‑143 (MQ=255)                                                                                                               gTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCa                         <  1:179811/143‑1 (MQ=255)                                                                                                                    tgtgGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCg               >  4:50906/1‑148 (MQ=255)                                                                                                                      tgGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGc             >  4:154938/1‑148 (MQ=255)                                                                                                                                 gTGCCCGCGAATGGCCGCACCCCTTGTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTACGCCCCTGCGGCTGCCCCACCTGCATCCGCCCCAGGTGGCTGTCCTACCCCTCCGGCCCCGGTGCATc  >  5:95739/1‑148 (MQ=255)                                                                                                                                      |                                                                                                                                               GGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013752‑6014027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑