| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,070,248 | +GA | intergenic (+48/+94) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,070,246 | 1 | . | G | 95.8% | 222.3 / 3.3 | 73 | intergenic (+46/+96) | aroP‑I/PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base G (36/32); total (38/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
| * | NC_002947 | 1,070,246 | 2 | . | A | 95.9% | 220.9 / 3.0 | 73 | intergenic (+46/+96) | aroP‑I/PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base A (38/32); total (38/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.20e-01 | |||||||||||
CCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGT‑‑GA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGC > NC_002947/1070098‑1070381 || ccTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGTCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCTCCtgt < 1:339066/149‑1 (MQ=255) cTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCtgt > 7:291462/1‑148 (MQ=255) tGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCtgt > 5:233432/1‑147 (MQ=255) aCGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGT‑‑Ga < 5:385510/147‑1 (MQ=255) gccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGT‑‑Gagatcgag < 8:91331/149‑8 (MQ=255) gATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAgcgc > 8:94586/1‑149 (MQ=255) cATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCcgcgcg > 4:179823/1‑149 (MQ=255) ctcGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCgcgggc > 7:120419/1‑149 (MQ=255) cGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCgcgggcgg > 5:36571/1‑149 (MQ=255) ggTAATGCTGCTCCCGGCATTGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGTAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTTTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCgcgggcgg < 4:134284/148‑1 (MQ=38) ggTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCgcgggcg < 8:291462/147‑1 (MQ=255) taTGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCt > 4:261178/2‑149 (MQ=255) gCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCATAGCCTGTGAGA‑‑TCGAGCGCCGCCCGCGCGgcgc > 3:166786/1‑145 (MQ=38) gCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGCTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGa < 3:261178/149‑1 (MQ=255) cTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGAt > 3:294554/1‑149 (MQ=255) tCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTca > 1:296246/1‑149 (MQ=255) cGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAg < 5:138651/149‑1 (MQ=255) gCATGGATCGCTGTGCTGGGGGTGGCTTTCAAGCTGAAGAAGGCGCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑ACGGGGTATGCCGTTAGGTTTGCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGc < 1:365817/149‑1 (MQ=38) cATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTca < 7:133356/143‑1 (MQ=255) cATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTca > 8:133356/1‑143 (MQ=255) gATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGgcgc < 7:119228/130‑1 (MQ=255) gATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGgcgc > 8:119228/1‑130 (MQ=255) gATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCCCGCGCGGCGCTCGa < 2:9571/134‑1 (MQ=38) gATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCCCGCGCGGCGCTCGa > 1:9571/1‑134 (MQ=38) aTCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGa > 3:37518/1‑148 (MQ=255) aTCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGa > 6:4597/1‑148 (MQ=255) aTCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGCCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGa > 1:276248/1‑148 (MQ=255) tCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGaaa < 4:294554/149‑1 (MQ=255) ctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGCATGCCTTTAGGCTTTCATCGCCTGTGAGA‑‑TCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCGAAAACCTaacg > 6:70576/1‑147 (MQ=18) gggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCAt < 6:36571/149‑1 (MQ=255) gggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGCATGCCTTTAGGCTTTCATCGCCTGTGAGA‑‑TCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCGAAAACCTaac < 3:321806/144‑2 (MQ=17) gggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGCATGCCTTTAGGCTTTCATCGCCTGTGAGA‑‑TCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCGAAAACCTaac > 4:321806/1‑143 (MQ=17) ggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCAAAGGCGATGAAAGCCTAAAG‑GCATg > 6:277604/1‑149 (MQ=255) tggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCg > 2:121703/1‑149 (MQ=255) gCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTGAAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGt > 1:102850/1‑149 (MQ=38) cTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGCATGCCTTTAGGCTTTCATCGCCTGTGAGA‑‑TCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCGAAAACCTAACG‑GCAtacccct < 5:70576/149‑7 (MQ=14) tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTg > 7:152161/1‑149 (MQ=255) tCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTgg < 2:146740/148‑1 (MQ=255) tCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTg < 2:276248/147‑1 (MQ=255) aGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGAAATCCCAGGCGGTGAAAGCCGAAAG‑GCATGCGTCTggcggc > 4:19250/1‑149 (MQ=38) gCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGcc < 8:152161/149‑1 (MQ=255) gCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCACGCGTCAgggccgc > 3:66782/1‑144 (MQ=38) aagaagGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGa < 4:261570/149‑1 (MQ=255) ggCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCAGTTAGA‑‑TACAGCGCCGCGCGGGCGGCCCGCGATGTAAAACGCGAGGAAAGCCGAAAG‑CCAATCGTCTGGCGGCCCATAC‑GCGt > 6:248071/1‑149 (MQ=255) cGCCAGGCCAAGGGCTGATCGGGTGTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTccc < 3:179823/149‑1 (MQ=255) gCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGAGCATGCGTCTGGCGGCCCTGAC‑GCGTTc < 1:223857/147‑1 (MQ=38) gCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTcc < 4:37518/147‑1 (MQ=255) gCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTc > 2:223857/1‑146 (MQ=255) ccAGGCCAAGGGCTGATCGGGTTTATTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGGTCGATCTCACAGGCGATGAAAGCCGAAAG‑GCATGCGACTGGAGGCCCTGAC‑GCGTTcccat > 7:241756/1‑147 (MQ=37) cAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCtt < 2:296246/149‑1 (MQ=255) cAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCT‑AAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTccc > 7:15456/1‑140 (MQ=38) cAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCT‑AAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTccc < 8:15456/140‑1 (MQ=38) aaGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTTAGA‑‑TAGAGCGCCGCGCGGGCCGCGCTAGATATCACAAGCGATGAAAGCCTAAAG‑GCATGCGTCATGCGGCCCTGAA‑GCGTTCCCCTTCCATGc > 2:381350/1‑149 (MQ=255) cTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTggcg < 6:114896/119‑1 (MQ=255) cTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTggcg > 5:114896/1‑119 (MQ=255) cTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTc < 6:233432/149‑1 (MQ=255) gATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCaa > 7:194197/1‑149 (MQ=255) tCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTAAAt > 5:289595/1‑148 (MQ=255) gggTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAAtgc < 2:102850/148‑1 (MQ=255) ttGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGTGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGACAGCGTTCCCCTTCCATGCCCCTCAAtgctgc < 1:235596/148‑1 (MQ=38) ttGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGTGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAAtgctgc > 2:235596/1‑147 (MQ=255) ttGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCt > 2:65343/1‑149 (MQ=255) gggTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGc < 4:128783/142‑1 (MQ=255) gggTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGc > 3:128783/1‑142 (MQ=255) gggTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcac < 1:121703/149‑1 (MQ=255) gTATGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcacg > 2:35598/1‑148 (MQ=255) aTGCCTTTAGGCTTTCATCGCCTGTGAGA‑‑TCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcacgcac > 7:208547/1‑149 (MQ=21) tGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcacgcac < 5:248071/148‑1 (MQ=255) tGCCGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGcaca < 1:65343/149‑1 (MQ=255) tGCCGTTAGGTTTTCGGCGCCTGT‑‑GAGTTCGTGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcacgcac < 7:195138/148‑1 (MQ=255) ccGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGAGTCTGGCGGCCCTGAC‑GCGGTCCCCTTCCAAGCCCCTCAATGCTGCCTCCGCCAAGAACGcaca > 4:234714/1‑147 (MQ=37) cGTTAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtg < 8:120419/149‑1 (MQ=255) ttAGGTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTACATGCCCCTCAATTCTGCCTCCGCCAAGCAAGCACAgtggt > 6:142053/1‑149 (MQ=38) ggTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGCGCGGCGCTCGATCTCACAGGCGAAGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACACACAGTGGTGTa > 8:303664/1‑149 (MQ=38) gTTTTCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTAc < 7:94586/149‑1 (MQ=255) tCGGCGCCTGTGAGA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGc < 6:289595/148‑1 (MQ=255) || CCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGT‑AAGGGGTATGCCGTTAGGTTTTCGGCGCCTGT‑‑GA‑‑TCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAG‑GCATGCGTCTGGCGGCCCTGAC‑GCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGC > NC_002947/1070098‑1070381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |