Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	139.8 / NA	42	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (25/17);  total (25/17)

GAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013739‑6014027                                                                                                                                                    |                                                                                                                                                gAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCCCCCCCCCTCCCACAGGTGCAGCACAGGTCTCGCACGCAGTGGC‑GGAACAGTGGGAGCGGGCGTGCCCGc                                                                                                                                               >  6:266394/1‑149 (MQ=255)                      tCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTACCACAGGTGCAGCACAGGGATCGAAAGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAAATGCCGCAACCCATTTa                                                                                                                           >  3:184165/1‑148 (MQ=37)                        gCTGGAAGGTGGTGTGGGCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGGCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATc                                                                                                                         <  7:88116/148‑1 (MQ=255)                            gAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGtt                                                                                                                    <  5:92779/149‑1 (MQ=255)                                 gggtttggtCAGCTTCAGCGAATACAGCCGACACCTGCTTCGCGGGCACTCCCGCTCCCCCAGGGCCTGCACAGGTCTCCAACGCTGTGCC‑GTCCCTGTGGTAGCGGGGGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgccgc                                                                                                               <  4:209067/148‑1 (MQ=255)                                          cAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGc                                                                                                                                        <  8:241396/115‑1 (MQ=255)                                          cAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGc                                                                                                                                        >  7:241396/1‑115 (MQ=255)                                           aGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGcc                                                                                                     <  5:266394/149‑1 (MQ=255)                                                cATCTAAAAAACGCCCAACCTGCTCCGCGGGCACGCCCGCTCCCCCCGGTCCCCCACCGGTCTCCAACGCTGGCCC‑GTACCTGGGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaa                                                                                                <  5:41748/149‑1 (MQ=25)                                                                    tGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttctt                                                                            >  5:156938/1‑149 (MQ=255)                                                                          gcgGGCACGCCCGCTCCCAGAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                      <  4:77114/149‑1 (MQ=255)                                                                                      gCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCt                                                          >  1:50573/1‑149 (MQ=255)                                                                                        tCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                        >  2:2147/1‑149 (MQ=255)                                                                                          ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcc                                                       >  1:202496/1‑149 (MQ=255)                                                                                            acaGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                                     >  8:71703/1‑148 (MQ=255)                                                                                                   cagcaCAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgc                                                                                                                  <  7:81384/80‑1 (MQ=255)                                                                                                   cagcaCAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgc                                                                                                                  >  8:81384/1‑80 (MQ=255)                                                                                                     gcaCAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATcc                                           <  6:156938/149‑1 (MQ=255)                                                                                                      cacaGGTCTAGAACGCTCAGCC‑GTACCTGTGGGAGACGGCGTGCCCGCCAAAGGCCGAAACCCTTTTAACTGGTTGCCGCCAGCCAAGCAAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTCAGCCTGCCCCAACTGCATCCg                                          >  2:288506/1‑149 (MQ=255)                                                                                                       acaGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGc                                         >  6:219281/1‑149 (MQ=255)                                                                                                         aGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATc                                                                                                                         <  8:39244/67‑1 (MQ=255)                                                                                                           gTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGccc                                       >  8:200534/1‑147 (MQ=255)                                                                                                            tctcGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                                    <  5:219281/149‑1 (MQ=255)                                                                                                                gAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑Tgg                               >  4:10595/1‑149 (MQ=255)                                                                                                                gAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑Tgg                               >  6:231148/1‑149 (MQ=255)                                                                                                                 aaCGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCTCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAATCCACTGCGTCTGCCCCAACTGCATcc                                           <  5:61998/137‑1 (MQ=39)                                                                                                                 aaCGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATcc                                           >  6:61998/1‑137 (MQ=255)                                                                                                                    gCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCttt                           >  4:258856/1‑149 (MQ=255)                                                                                                                          cc‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCATAcc                     >  5:254398/1‑149 (MQ=255)                                                                                                                          cc‑GTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCATAcc                     >  4:126062/1‑149 (MQ=255)                                                                                                                           c‑GTCCCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGGAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACAGCATCCGCCCCAGG‑TGGCTTTCATAccc                    <  6:227520/149‑1 (MQ=255)                                                                                                                                 cTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCAt                        >  1:298097/1‑140 (MQ=255)                                                                                                                                 cTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCAt                        <  2:298097/140‑1 (MQ=255)                                                                                                                                 cTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCATACCCCTCCg               >  2:142258/1‑149 (MQ=255)                                                                                                                                  tgtgGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCtt                            >  7:153786/1‑135 (MQ=255)                                                                                                                                  tgtgGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCtt                            <  8:153786/135‑1 (MQ=255)                                                                                                                                        aGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑t                                 >  3:72861/1‑124 (MQ=255)                                                                                                                                        aGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑t                                 <  4:72861/124‑1 (MQ=255)                                                                                                                                         gCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGCTGGCTTTCATACCCCTCCGGCCCCgg        <  1:4225/149‑1 (MQ=255)                                                                                                                                         gCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCATACCCCTCCGGCCCCgg        >  2:4225/1‑148 (MQ=255)                                                                                                                                            ggCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCATACCCCTCCGGCCCCGGTGCa    >  6:276329/1‑149 (MQ=255)                                                                                                                                               gTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCATACCCCTCCGGCCCCGGTGCATc  >  8:178981/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                GAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCC‑GTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGG‑TGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013739‑6014027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑