| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 4,586,030 | 2 bp→TC | intergenic (+113/+101) | PP_4061 → / ← PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,586,030 | 0 | C | T | 100.0% | 85.5 / NA | 27 | intergenic (+113/+102) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (12/15); total (12/15) | |||||||||||
| * | NC_002947 | 4,586,031 | 0 | T | C | 100.0% | 85.3 / NA | 27 | intergenic (+114/+101) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (12/15); total (12/15) | |||||||||||
CCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑GGTAAA‑CCCGCTCCTACCA‑GGGA‑CGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGA > NC_002947/4585893‑4586112 || ccAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑c < 6:252488/149‑1 (MQ=255) gAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGc < 8:113198/149‑1 (MQ=255) gCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTc < 7:96761/149‑1 (MQ=255) cACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGCGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑ggg > 1:44664/1‑135 (MQ=255) cACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGCGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑ggg < 2:44664/136‑2 (MQ=255) aCCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTa > 1:192399/1‑149 (MQ=255) gTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTACATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑g > 8:9537/1‑149 (MQ=39) ttAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATTCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑ACCGCTCCTACCA‑GGGA‑ccgt > 1:55725/1‑146 (MQ=38) ggTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGc > 4:212886/1‑149 (MQ=39) gTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGcc > 6:25912/1‑149 (MQ=39) tAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGGGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCt < 3:243456/149‑1 (MQ=38) ccACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGaa < 6:185693/149‑1 (MQ=39) aaCAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTg > 1:155566/1‑149 (MQ=39) gCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAg < 5:25912/149‑1 (MQ=39) tGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTg > 5:49402/1‑143 (MQ=38) tGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTg < 6:49402/143‑1 (MQ=38) tCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGc < 7:9537/148‑1 (MQ=39) gcgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCggg < 2:155566/148‑1 (MQ=38) cgcTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCgg < 3:212886/146‑1 (MQ=38) ctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCgg < 4:30719/141‑1 (MQ=38) ctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCgg > 3:30719/1‑141 (MQ=38) ctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAc < 2:192399/147‑1 (MQ=38) tCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTTAA‑CCCGCTACTACCAGGGGA‑CGTGCCGGCCTTGAATGCGGCGCTGGCCCTGGTAGGAGCGGGTTTTcccc > 1:34173/1‑148 (MQ=255) ccATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTACTAACACGGCC‑CCTGCCGGCCGTGAATGCGGCGCTGCCCCGGGTAGGATCGGGGTTAccccc > 6:224639/1‑147 (MQ=255) aacggTTGCGGATGACCGGGTGCTGGGAAAGGTCACGATCTTGCATTCATCGGGCCGGCCTCTTCGC‑GGGAAACCCCGCGCCTCCCC‑GGCACCGGGCCGGCCTTGAATGCGGCGCGGCCCCTGGTAGGAGCGGGTTTACCCGCGAaga < 8:32610/145‑1 (MQ=19) gTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAc > 4:170861/1‑120 (MQ=37) gTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCA‑GGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAc < 3:170861/120‑1 (MQ=37) || CCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGA‑TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑GGTAAA‑CCCGCTCCTACCA‑GGGA‑CGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGA > NC_002947/4585893‑4586112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |