Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,580,682 Δ1 bp 6.9% coding (2746/3321 nt) treSB ← bifunctional trehalose synthase B/maltokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,580,6820C. 6.9% 185.1 / 7.1 58coding (2746/3321 nt)treSBbifunctional trehalose synthase B/maltokinase
Reads supporting (aligned to +/- strand):  ref base C (27/27);  new base . (2/2);  total (29/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

CACCACGAGCACCTGGCCCAGGTGCAGGTCGCCGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCCAGCAGCAGGTGCATC  >  NC_002947/4580536‑4580830
                                                                                                                                                  |                                                                                                                                                    
caccacGAGCACCTGGCCCAGGTGCAGGTCGCCGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTc                                                                                                                                                      <  1:168861/147‑1 (MQ=255)
    acGAGCACCTGGCCCAGGTGCAGGTCGCCGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAgtgt                                                                                                                                                <  1:146536/149‑1 (MQ=255)
           ccTGGCCCAGGTGCAGGTCGCCGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGa                                                                                                                                         >  8:131288/1‑149 (MQ=255)
               gCCCAGGTGCAGGTCGCCGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTc                                                                                                                                                      <  3:249392/132‑1 (MQ=255)
               gCCCAGGTGCAGGTCGCCGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTc                                                                                                                                                      >  4:249392/1‑132 (MQ=255)
                          ggTCGCCGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAgg                                                                                                                          <  7:171910/149‑1 (MQ=255)
                               ccGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAg                                                                                                                     <  7:131288/149‑1 (MQ=255)
                                  tgtACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCttg                                                                                                                                   <  1:235531/132‑3 (MQ=255)
                                  tgtACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTgg                                                                                                                                   >  2:235531/1‑132 (MQ=255)
                                     acacGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAgtg                                                                                                                                                 <  1:70970/115‑1 (MQ=255)
                                     acacGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAgtg                                                                                                                                                 >  2:70970/1‑115 (MQ=255)
                                     acacGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGt                                                                                                                <  1:59823/148‑1 (MQ=255)
                                      cacGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTgg                                                                                                              <  8:228478/149‑1 (MQ=255)
                                         gCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTcg                                                                                                                                            >  6:115096/1‑116 (MQ=255)
                                         gCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTcg                                                                                                                                            <  5:115096/116‑1 (MQ=255)
                                           aTAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGtcag                                                                                                         >  1:91741/1‑149 (MQ=255)
                                                   gCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGc                                                                                                 >  7:335622/1‑149 (MQ=255)
                                                    ccACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGGCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCt                                                                                                <  5:301196/149‑1 (MQ=255)
                                                                  cttgctCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCacac                                                                                   >  1:307461/1‑148 (MQ=255)
                                                                   ttgctCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCacac                                                                                   >  6:334223/1‑147 (MQ=255)
                                                                       tCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAgcgc                                                                             >  5:335435/1‑149 (MQ=255)
                                                                       tCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGcgct                                                                            >  6:359302/1‑149 (MQ=255)
                                                                       tCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGcgct                                                                            >  6:364159/1‑149 (MQ=255)
                                                                            gtgtCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGcgctcgct                                                                        <  8:335622/149‑1 (MQ=255)
                                                                             tgtCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTg                                                                                               <  7:214502/125‑1 (MQ=255)
                                                                             tgtCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTg                                                                                               >  8:214502/1‑125 (MQ=255)
                                                                                 gATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCt                                                                   >  6:310188/1‑149 (MQ=255)
                                                                                   tgtgCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGTCCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTgc                                                                 <  5:310188/149‑1 (MQ=255)
                                                                                      gCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCa                                                              >  2:29349/1‑149 (MQ=255)
                                                                                       cTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCAt                                                             >  5:214879/1‑149 (MQ=255)
                                                                                        tGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGAGTGGCTATCGCTGTCCAGTCTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATc                                                            >  3:130445/1‑149 (MQ=255)
                                                                                           gCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAgg                                                                                                                          >  8:327442/1‑84 (MQ=255)
                                                                                           gCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAgg                                                                                                                          <  7:327442/84‑1 (MQ=255)
                                                                                            ccAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTgg                                                       <  5:359302/149‑1 (MQ=255)
                                                                                            ccAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTgg                                                       <  5:364159/149‑1 (MQ=255)
                                                                                                       cGCTGCTGCGGCAGGCCCTCGACCAAGCACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTg                                             <  2:307461/149‑1 (MQ=255)
                                                                                                        gCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCgg                                                <  2:171735/145‑1 (MQ=255)
                                                                                                        gCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCgg                                                >  1:171735/1‑145 (MQ=255)
                                                                                                        gCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTg                                             >  4:62393/1‑148 (MQ=255)
                                                                                                            ttGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGaa                                          <  2:91741/147‑1 (MQ=255)
                                                                                                               ctgcAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGcc                                      <  6:335435/148‑1 (MQ=255)
                                                                                                               ctgcACGTCGCCGACCAAGGACTTGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGTCGTGTGTCAGTTCACTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCTCATCGCTGGGGCGCGGCTGGAAGGcc                                      <  4:130445/148‑1 (MQ=255)
                                                                                                                  cAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCgg                                    <  5:334223/147‑1 (MQ=255)
                                                                                                                       cgtcgACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCg                             >  8:177338/1‑149 (MQ=255)
                                                                                                                        gtcgACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCgg                            >  2:79644/1‑149 (MQ=255)
                                                                                                                           gACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCggtgg                         <  1:79644/149‑1 (MQ=255)
                                                                                                                             ccAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCggtgggt                       >  4:137671/1‑149 (MQ=255)
                                                                                                                             ccAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCggtgggt                       >  4:157359/1‑149 (MQ=255)
                                                                                                                              cAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTgc                                                                 <  5:169226/106‑1 (MQ=255)
                                                                                                                              cAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTgc                                                                 >  6:169226/1‑106 (MQ=255)
                                                                                                                                    cTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGc                  >  4:243769/1‑147 (MQ=255)
                                                                                                                                     tGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCcag               >  7:300328/1‑149 (MQ=255)
                                                                                                                                       gCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCcag               >  5:57493/1‑147 (MQ=255)
                                                                                                                                       gCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCcag               >  1:210855/1‑147 (MQ=255)
                                                                                                                                           tCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCcagcagcag         <  3:157359/149‑1 (MQ=255)
                                                                                                                                             gCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCCAGCAGCAgg        <  6:57493/148‑1 (MQ=255)
                                                                                                                                             gCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCCAGCAGCAgg        <  2:210855/148‑1 (MQ=255)
                                                                                                                                                gTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGcc                                      >  2:199150/1‑115 (MQ=255)
                                                                                                                                                gTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGcc                                      <  1:199150/115‑1 (MQ=255)
                                                                                                                                                 tCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCCAGCAGCAGGTGCAt   <  6:214879/149‑1 (MQ=255)
                                                                                                                                                 tCCAGTGTGTCGCGATGCTGGGCCAGCAGGGCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCCAGCAGCAGGTGc     <  1:151588/147‑1 (MQ=255)
                                                                                                                                                  ccAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCCAGCAGCAGGTGCAtc  >  6:270282/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CACCACGAGCACCTGGCCCAGGTGCAGGTCGCCGTGTACACGCATAAGCAGGCCACCCTGAGCCTGCTTGCTCAGGGTGTCGATGTGCTGGGCCAGGCCGTCACGCTGTTGCTGCAGGTCGTCGACCAAGGACTGGCTATCGCTGTCCAGTGTGTCGCGATGCTGGGCCAGCAGGTCGAGGGCGTGGGTCAGTTCAGTGCTGATCTGTGCACACCAGCGCTCGCTGTCCTGCGCATCGCTGGGGCGCGGCTGGAAGGCCGGGTCTTCGGTGGGTGCGGCCAGCAGCAGGTGCATC  >  NC_002947/4580536‑4580830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: