| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,137,976 | Δ1 bp | 5.8% | coding (431/1254 nt) | czcC → | CzcC family metal RND transporter outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,137,976 | 0 | T | . | 5.8% | 217.7 / 6.9 | 69 | coding (431/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (34/31); new base . (2/2); total (36/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.25e-01 | |||||||||||
GTGGTCGGTCTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCG > NC_002947/6137834‑6138121 | gtggtCGGTCTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGc < 5:231427/149‑1 (MQ=255)gtggtCGGTCTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGc < 5:226407/149‑1 (MQ=255) tcggtcTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTac > 7:54555/1‑149 (MQ=255) cggtcTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTaca > 4:76795/1‑149 (MQ=255) tcTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACAccc > 6:263958/1‑149 (MQ=255) tcTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCAAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACAccc < 2:111856/149‑1 (MQ=255) tcAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AAc > 2:28066/1‑149 (MQ=255) aggTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCaaa < 7:190317/149‑1 (MQ=255) tGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTg < 8:30874/149‑1 (MQ=255) cAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTgcag > 6:27839/1‑148 (MQ=255) cAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGA‑TACTGCGTACACCCTGC‑a < 8:26460/134‑1 (MQ=255) cAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGA‑TACTGCGTACACCCTGC‑a > 7:21071/1‑134 (MQ=255) cAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGA‑TACTGCGTACACCCTGC‑a > 7:26460/1‑134 (MQ=255) cAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGA‑TACTGCGTACACCCTGC‑a < 8:21071/134‑1 (MQ=255) aaTCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTgc > 1:8398/1‑145 (MQ=255) aaTCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTgc < 2:8398/145‑1 (MQ=255) cgACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTc > 5:284694/1‑148 (MQ=255) gACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGGAGCAGTTCGa < 3:121129/149‑1 (MQ=255) gACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGa < 7:283353/149‑1 (MQ=255) aaaCGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCAGGCTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGa > 1:102835/1‑148 (MQ=255) aaaCGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTgca < 4:304734/137‑1 (MQ=255) aaaCGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTgca > 3:304734/1‑137 (MQ=255) aaaCGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAACCCTGGATTACTGCGTACACACTGC‑AACGCAACCTGAAGCAGTTCGACAt > 2:124490/1‑149 (MQ=255) aCGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATACCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTacac < 4:255023/117‑1 (MQ=255) aCGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATACCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTacac > 3:255023/1‑117 (MQ=255) gCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGa < 5:267166/142‑1 (MQ=255) gCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACCGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGa > 6:267166/1‑142 (MQ=255) gcgcGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCaa > 6:347629/1‑149 (MQ=255) cgcgGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAAc < 5:27839/149‑1 (MQ=255) gcgGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACg < 6:284694/149‑1 (MQ=255) gAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCg > 3:185200/1‑149 (MQ=255) gAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCg > 2:128120/1‑149 (MQ=255) cTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTg < 8:54555/149‑1 (MQ=255) cACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAgcgg > 3:215287/1‑149 (MQ=255) cACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAgcgg > 3:170281/1‑149 (MQ=255) cACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGACCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAgcgg < 5:347629/149‑1 (MQ=255) gTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGgt < 1:28066/149‑1 (MQ=255) ttGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAgcggcg < 6:167460/146‑1 (MQ=255) ttGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAgcggcg > 5:167460/1‑146 (MQ=255) aCGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGgtgcgtg > 1:144434/1‑149 (MQ=255) tGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTgcgc < 5:263958/149‑1 (MQ=255) tGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTgcgc < 5:75331/149‑1 (MQ=255) aTGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTg < 1:128120/149‑1 (MQ=255) gCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGgc > 1:143648/1‑149 (MQ=255) ccGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGgc < 2:102835/148‑1 (MQ=255) aGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGccgccg > 6:224641/1‑149 (MQ=255) cA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACGGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCggg > 5:310146/1‑149 (MQ=255) cA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCggg < 3:76795/149‑1 (MQ=255) a‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCgggg < 2:283665/149‑1 (MQ=255) tGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCAGCCGGGggc > 8:118570/1‑149 (MQ=255) tttGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCggggg < 2:342150/146‑1 (MQ=255) tttGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCggggg > 1:342150/1‑146 (MQ=255) tGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGggcggc < 4:185200/148‑1 (MQ=255) aGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCCCCggcggccag < 4:170281/149‑4 (MQ=255) aGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCAGGGGCGGCGCt > 7:120959/1‑149 (MQ=255) cTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTccg > 4:233848/1‑149 (MQ=255) ttGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTccgc > 1:228794/1‑149 (MQ=255) aGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATg < 1:194091/149‑1 (MQ=255) gcgcCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTg > 6:87769/1‑149 (MQ=255) gccgccACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAgcgg > 2:212313/1‑97 (MQ=255) gccgccACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAgcgg < 1:212313/97‑1 (MQ=255) ccgccACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGcc < 2:228794/149‑1 (MQ=255) cGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGc > 6:115681/1‑149 (MQ=255) gCACAAGCCTGGATTACTGCGTACACCCTGCGAACGCAAAATGAAGCAGTTCGACATGATGTTCAACGAAAACCGTTTGATGGCAGCGGCGGTGCTTGCGCGCATGGCCGCCGGGGCCGGCGCTACCGCCGATCCCCTGGCCCCCGGc > 1:219017/1‑148 (MQ=255) cacaAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACa < 2:118828/54‑1 (MQ=255) cacaAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACa > 1:118828/1‑54 (MQ=255) gATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCcgcg > 3:239301/1‑148 (MQ=255) aTTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGccc < 6:161111/124‑1 (MQ=255) aTTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGccc > 5:161111/1‑124 (MQ=255) | GTGGTCGGTCTTTCTCAGGAGGTGCCCAATCGCGACAAACGCAAAGCGCGGGTCGAAACTGCACAGGCCACGGTTGAACGTGCGGATGCCGAAGCA‑‑CTGTTTGAGCGCTTGAAAGTGCGCGCCGCCACGGCACAAGCCTGGATTACTGCGTACACCCTGC‑AACGCAAACTGCAGCAGTTCGACATGCTGTTCAACGAAAACCGTTTGCTGGCAGCGGCGGTGCGTGCGCGCCTGGCCGCCGGGGGCGGCGCTTCCGCCGATGCCCTGGCCCCCGGCCAGGAGGCCGCG > NC_002947/6137834‑6138121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |