| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 684,841 | Δ1 bp | 10.8% | coding (1406/2400 nt) | cadA‑II ← | cadmium translocating P‑type ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 684,841 | 0 | T | . | 10.8% | 193.2 / 18.1 | 65 | coding (1406/2400 nt) | cadA‑II | cadmium translocating P‑type ATPase |
| Reads supporting (aligned to +/- strand): ref base T (27/31); new base . (4/3); total (31/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.19e-01 | |||||||||||
GCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGCCAGCCA > NC_002947/684703‑684986 | gCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGAt > 1:242931/1‑149 (MQ=255) cAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGc > 3:109496/1‑149 (MQ=255) cAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGc > 6:289600/1‑149 (MQ=255) cAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGc < 5:289600/149‑1 (MQ=255) cGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑Tg > 2:87488/1‑149 (MQ=255) aaaGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑Tggcgg > 2:290629/1‑149 (MQ=255) tCGGCGCTGTTGCCGTCCAGCGCCTGGCTATGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGggcggc > 6:204899/1‑149 (MQ=255) ggCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑a > 3:289659/1‑149 (MQ=255) cTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTGGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGTATGCCG‑‑TGGCGGGCGGCG‑‑Acc‑cc < 8:260441/149‑1 (MQ=255) ttGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑a < 1:331172/121‑1 (MQ=255) ttGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑a > 2:331172/1‑121 (MQ=255) tGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTa > 7:26292/1‑149 (MQ=255) gCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCtt > 5:305782/1‑114 (MQ=255) gCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCtt < 6:305782/114‑1 (MQ=255) cGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCg > 5:105949/1‑149 (MQ=255) gTCCAGCGCCTGGCTATGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCgg < 5:204899/149‑1 (MQ=255) cAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGcc < 6:105949/148‑1 (MQ=255) gCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCgcgg < 1:87488/149‑1 (MQ=255) tgtgAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑Acc > 7:240485/1‑125 (MQ=255) tgtgAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑Acc < 8:240485/125‑1 (MQ=255) tgtgAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCgcggcg > 3:304395/1‑149 (MQ=255) accaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGt < 3:150953/149‑1 (MQ=255) ccaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCgcggcg > 7:165571/1‑143 (MQ=255) ccaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCgcggcg < 8:165571/143‑1 (MQ=255) ccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGc > 6:79364/1‑148 (MQ=255) ccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGc < 5:79364/148‑1 (MQ=255) cTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCa < 2:242931/149‑1 (MQ=255) cTGCGGGCTGCCGGAGGTGAGGGTGCCGGTATTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGc > 1:30047/1‑147 (MQ=255) gggCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGcc < 4:109496/149‑1 (MQ=255) gCTGCCGGAGGGGAGGGTGCCGGGTTTGTCGACCCCTCCGCGGTTGACCGCATGGGCACGCGCCCGGGCTTCGGCAGCCTTGAGC‑AGGATGCCG‑‑GGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGGGGCCAGGCCGa < 5:218693/149‑1 (MQ=255) tGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAgg < 2:30047/149‑1 (MQ=255) gcccGCAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAgg < 2:257864/147‑1 (MQ=255) ccGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGgc > 2:121127/1‑149 (MQ=255) gAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGcggcgg < 3:303528/127‑1 (MQ=255) gAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGcggcgg > 4:303528/1‑127 (MQ=255) tGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAgggg < 1:121127/149‑1 (MQ=255) gTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGggcggc > 5:339175/1‑89 (MQ=255) gTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGggcggc < 6:339175/89‑1 (MQ=255) gtcGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGa > 7:308866/3‑149 (MQ=255) gCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCCGCC‑‑ACC‑CCGGTACCCGCCACGATCCCGGCGGGCGTGGCCAGGCCGAGGGCGGAGGGGCAGGCg > 8:225647/1‑148 (MQ=255) tACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggcgacgg > 7:189852/1‑149 (MQ=255) tACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggcgacgg > 7:165892/1‑149 (MQ=255) cgcgGTTGCCCGCATGGGCACGCTCCACGGCTTAGGCATCCTTGTTC‑ATGAAGGCGCCTGGCGGGCGGCGGCTCCACCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggc < 1:290629/147‑1 (MQ=255) cgcgGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggcgacggcg > 1:202686/1‑149 (MQ=255) cgGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGtt < 4:289659/149‑1 (MQ=255) cgGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGtt < 8:308866/149‑1 (MQ=255) cgGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGtt < 2:36306/149‑1 (MQ=255) ggTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTg < 5:3742/149‑1 (MQ=255) ggTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTg < 8:26292/149‑1 (MQ=255) gCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGcggcgg < 6:23807/85‑1 (MQ=255) gCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGcggcgg > 5:23807/1‑85 (MQ=255) aTGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCgg < 2:202686/149‑1 (MQ=255) ggCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGttt < 8:165892/149‑1 (MQ=255) cAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTa > 8:323679/1‑149 (MQ=255) aGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggcgac < 4:1847/119‑1 (MQ=255) aGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggcgac > 3:1847/1‑119 (MQ=255) gCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTAccc > 7:101284/1‑148 (MQ=255) ccacGGCATCC‑TGATCAAGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTa > 6:303908/4‑144 (MQ=255) ccacGGCATCC‑TGATCAAGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTa < 5:303908/141‑1 (MQ=255) ttCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTAccc < 6:247522/146‑1 (MQ=255) ttCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTAccc > 5:247522/1‑146 (MQ=255) acGGCATCC‑TGATCAAGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGc > 6:98024/2‑76 (MQ=38) acGGCATCC‑TGATCAAGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGc < 5:98024/75‑1 (MQ=38) ggCATCC‑TGATCAAGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCccagc > 6:105883/1‑147 (MQ=255) gCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCccagccag < 8:101284/149‑1 (MQ=255) cATCCTTGATC‑AGGCTGGCG‑‑TGGGGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGGGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCcagccagc < 4:90671/149‑1 (MQ=255) tCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAgccagcca < 7:323679/149‑1 (MQ=255) | GCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCG‑‑TGGCGGGCGGCG‑‑ACC‑CCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGCCAGCCA > NC_002947/684703‑684986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |