| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 343,512:1 | +A | 6.6% | intergenic (‑68/‑172) | PP_5439 ← / → PP_5440 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 343,512 | 1 | . | A | 6.6% | 249.3 / 10.2 | 61 | intergenic (‑68/‑172) | PP_5439/PP_5440 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (31/26); new base A (2/2); total (33/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.75e-01 | |||||||||||
CGCTGCGTACCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCAC > NC_002947/343366‑343660 | cGCTGCGTACCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGgc‑gc < 6:164397/149‑1 (MQ=255) aCCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGgc > 5:359697/1‑149 (MQ=255) ccATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGGCCGATA‑AACCCAAGCGGC‑GCTCCTGGgc < 2:197229/148‑1 (MQ=255) ccATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAgcggc > 8:142109/1‑138 (MQ=255) ccATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAgcggc < 7:142109/138‑1 (MQ=255) tGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTg > 8:66787/1‑149 (MQ=255) gTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGc > 1:346328/1‑149 (MQ=255) ttCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCt < 7:83069/149‑1 (MQ=255) cTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCtt < 6:132612/148‑1 (MQ=255) cTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTgag < 8:101264/148‑1 (MQ=255) cTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTg < 4:88627/146‑1 (MQ=255) ccTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCt < 2:75879/149‑1 (MQ=255) gCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCtgt < 2:346328/147‑1 (MQ=255) gCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGAGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCtgtg < 4:342416/148‑1 (MQ=255) cTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTgg < 6:359697/148‑1 (MQ=255) tGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGa > 1:324492/1‑149 (MQ=255) ggcgCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACa > 3:229316/1‑149 (MQ=255) gcgcgcTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACat < 7:66787/149‑1 (MQ=255) ttGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATc > 2:38988/1‑146 (MQ=255) ggCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGat > 5:142770/1‑149 (MQ=255) gcgcGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCTGCAGCGCCCAGGCGC‑GCCGCTTgg > 2:49253/1‑121 (MQ=38) gcgcGTTTCTGTTGCTTGGTAGGGGGGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGCTATAACCCAAGCTGCAGCGCCCAGGCGC‑GCCGCTTgg < 1:49253/123‑2 (MQ=37) gcgTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGattat < 4:67894/149‑1 (MQ=255) cgTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGattatt < 6:211047/149‑1 (MQ=255) ttCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGa > 3:102780/1‑141 (MQ=255) ttCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGa < 4:102780/141‑1 (MQ=255) cTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGAc > 3:243816/1‑149 (MQ=255) gTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGAGGCAGATTGAGATGTCTTTGGGATACATATCCAGATTATACggccgg > 6:128557/1‑145 (MQ=255) ttGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCtgtg < 4:230312/121‑1 (MQ=255) ttGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGt < 4:229316/149‑1 (MQ=255) ttGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGCTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCtgtg > 3:230312/1‑121 (MQ=255) ggTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGccc > 8:288918/1‑149 (MQ=255) ggTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGccc > 1:343168/1‑149 (MQ=255) cATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTtct > 6:219410/1‑149 (MQ=255) gggAAATCCTTGGGTGAGTCTGAAAGTGCGCGTCTTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTtctctc < 6:302597/148‑1 (MQ=255) gggAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTtctctc < 4:243816/148‑1 (MQ=255) ggAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCct < 1:38988/149‑1 (MQ=255) tCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCTGCAGCGCCCAGgcgcgcc > 5:7936/1‑62 (MQ=25) tCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCTGCAGCGCCCAGgcgcgcc < 6:7936/65‑4 (MQ=25) tCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtgg > 7:90068/1‑149 (MQ=255) tGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGGCTGGGCGCTGCAGCTTGAGATGTCtgtg < 1:203157/79‑1 (MQ=255) tGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCtgtg > 2:203157/1‑79 (MQ=255) tGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggct > 4:34531/1‑149 (MQ=255) gAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggctg > 4:297589/1‑149 (MQ=255) aaaGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAACAtggctgg > 8:151539/1‑149 (MQ=255) aaGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAACAtggctggc < 7:151539/149‑1 (MQ=255) tGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAACATGGCTGGCAGc < 1:25724/149‑1 (MQ=255) gcgTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTg > 8:72619/1‑149 (MQ=255) gcgTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTg > 5:263610/1‑149 (MQ=255) gTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGt > 8:305071/1‑148 (MQ=255) gcgcAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc > 5:4538/1‑148 (MQ=255) gcAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATAACCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCaa < 2:324492/149‑1 (MQ=255) aaTTGCCCGATA‑AACCCAAGCGTC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGt > 7:54923/1‑121 (MQ=255) aaTTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGt < 8:54923/121‑1 (MQ=255) cGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc < 7:277844/137‑1 (MQ=255) cGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc > 8:277844/1‑137 (MQ=255) gATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCctgctg > 4:24471/1‑103 (MQ=255) gATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCctgctg < 3:24471/103‑1 (MQ=255) aCCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgag > 3:209593/1‑149 (MQ=255) ccAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGt < 6:12357/121‑1 (MQ=255) ccAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGt > 5:12357/1‑121 (MQ=255) ccAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagt > 3:29459/1‑148 (MQ=255) ccAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagt > 6:136545/1‑148 (MQ=255) cAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtga > 5:188802/1‑149 (MQ=255) gc‑gcgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCTGCGTCCGTGTGTGATGCGCa > 8:143975/1‑149 (MQ=255) gc‑gcgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCa < 2:343168/149‑1 (MQ=255) c‑gcgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCAc < 7:288918/149‑1 (MQ=255) | CGCTGCGTACCATGCGGTTCTGCTTGGCCTTGCTGGCGGCGCGCTTGGCGCGTTTCTGTTGCTTGGTAGGGGTGGCCATGGGGAAATCCTTGGGTGAGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATA‑AACCCAAGCGGC‑GCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCAC > NC_002947/343366‑343660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |