New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 38445 = | 64 (1.160) | 5 (0.090) | 5/244 | NT | 7.5% | coding (185/984 nt) | PP_0034 | bactoprenol glycosyl‑transferase |
? | NC_002947 | 38482 = | 63 (1.190) | coding (148/984 nt) | PP_0034 | bactoprenol glycosyl‑transferase |
TGATCCCTTGTTAACCATCGTGGTCCCTTGCTTCCAGGAAGAGGAAACCATCCCCGAGTTCCACCAGCGAATCACCCGCGTGGTGAAGCGCTTACCCGTCTCCTGCGAAATCCTCTATGTCGACGACGGCAGTAATGACCGGAC‑GGCCGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/38597‑38445 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacatAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGATGTAATGTCTGC > NC_002947/38482‑38627 TGATCCCTTGTTAACCATCGTGGTCCCTTGCTTCCAGGAAGAGGAAACCATCCCCGAGTTCCACCAGCGAATCACCCGCGTGGTGAAGCGCTTACCCGTCTCCTGCGAAATCCTCTATGTCGACGACGGCAGTAATGACCGGAC‑GGCC > 6:331572/1‑148 TTGTTAACCATCGTGGTCCCTTGCTTCCAGGAAGAGGAAACCATCCCCGAGTTCCACCAGCGAATCACCCGCGTTGTGAAGCGCTTACCCGTCTCCTGCGAAATCCTCTATGTCGACGACGGCAGTAATGACCGGAC‑GGCCGA < 5:250567/143‑1 TTGTTAACCATCGTGGTCCCTTGCTTCCAGGAAGAGGAAACCATCCCCGAGTTCCACCAGCGAATCACCCGCGTGGTGAAGCGCTTACCCGTCTCCTGCGAAATCCTCTATGTCGACGAAGGCAGTAATGCCAGGAC‑TGCCGA > 6:250567/1‑143 AATCCTCTATGTCGACGACGGCAGTAATGACCGGAC‑GGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGT > 7:104882/1‑148 CTCTATGTCGACGACGGCAGTAATGACCGGACGGGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAA > 1:53524/1‑148 TCTATGTCGACGACGGCAGTAATGACCGGAC‑GGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTC > 5:33305/1‑88 TCTATGTCGACGACGGCAGTAATGACCGGAC‑GGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTC < 6:33305/88‑1 TGTCGACGACGGCAGTAATGACCGGAC‑GGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGG < 2:53524/147‑1 GACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGATGTAATGTCT > 3:251119/1‑149 GACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGATGTAATGTC < 2:297493/148‑1 CATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGATGTAATGTCTGC < 6:184334/149‑1 ATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGAGATTCGCTGGTGGAACACGGGGATGGTTTCCTCTTCCAGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGATCTAATGTCTGC > 3:475/1‑148 TGATCCCTTGTTAACCATCGTGGTCCCTTGCTTCCAGGAAGAGGAAACCATCCCCGAGTTCCACCAGCGAATCACCCGCGTGGTGAAGCGCTTACCCGTCTCCTGCGAAATCCTCTATGTCGACGACGGCAGTAATGACCGGAC‑GGCCGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/38597‑38445 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacatAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGATGTAATGTCTGC > NC_002947/38482‑38627 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |