| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 165552 = | 73 (1.320) | 6 (0.110) | 5/248 | NT | 8.5% | coding (222/315 nt) | pntAB | pyridine nucleotide transhydrogenase subunit alpha |
| ? | NC_002947 | 165610 = | 59 (1.100) | coding (164/315 nt) | pntAB | pyridine nucleotide transhydrogenase subunit alpha | |||||
CACGTGGTGTGGAACGTCACCCCGGCGCTGCACACCCCACTGATGGCGGTCACCAATGCCATCTCGGCAATCGTCATCGTCGGCGCCATGCTGGCCGCGGCCCTGACCGTGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/165701‑165552‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTCCACACCACGTGGTAGCCCACATAGATGGCCAGCACGAAAATGATCAGGTTGTAGATGCCGTGGG > NC_002947/165610‑165754 CACGTGGTGTGGAACGTCACCCCGGCGCTGCACACCCCACTGATGGCGGTCACCAATGCCATCTCGGCAATCGTCATCGTCGGCGCCATGCTGGCCGCGGCCCTGACCGTGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGC > 1:42894/1‑149CACGTGGTGTGGAACGTCACCCCGGCGCTGCACACCCCACTGATGGCGGTCACCAATGCCATCTCGGCAATCGTCATCGTCGGCGCCATGCTGGCCGCGGCCCTGACCGTGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGC > 6:242709/1‑149 GCCGCGGCCCTGACCGTGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGCCAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTCCACACCACGTG > 3:105137/1‑149 GCCGCGGCCCTGACCGTGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGCCAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTCCACACCACGTG > 5:260896/1‑149 CGCGGCCCTTACCGTGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGCCAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTC < 8:46341/136‑1 CGCGGCCCTAACCGTGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGCCAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTC > 7:46341/1‑136 TGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGCCAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTCCACACCACGTGGTAGCCCACATAGATG < 6:260896/149‑1 GAAAGCTGATGGGCACCCTGGCCGTGGCCAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTCCACACCACGTGGTAGCCCACATAGATGGCCAGCACGA < 4:105137/147‑1 GGCCAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTCCACACCACGTGGTAGCCCACATAGATGGCCAGCACGAAAATGATCAGGTTGTAGATGCCGTGGG < 5:88104/149‑1 CACGTGGTGTGGAACGTCACCCCGGCGCTGCACACCCCACTGATGGCGGTCACCAATGCCATCTCGGCAATCGTCATCGTCGGCGCCATGCTGGCCGCGGCCCTGACCGTGACCCCAGCTGGAAAGCTGATGGGCACCCTGGCCGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/165701‑165552‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGCATGGCGCCGACGATGACGATTGCCGAGATGGCATTGGTGACCGCCATCAGTGGGGTGTGCAGCGCCGGGGTGACGTTCCACACCACGTGGTAGCCCACATAGATGGCCAGCACGAAAATGATCAGGTTGTAGATGCCGTGGG > NC_002947/165610‑165754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |