| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 203692 = | NA (NA) | 11 (0.210) | 4/248 | NT | NA | coding (9198/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 203763 = | NA (NA) | coding (9269/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
TCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/203841‑203692‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACTACCGTCA > NC_002947/203763‑203906 TCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTG > 5:191266/1‑149 CAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTG < 2:244175/148‑1 CAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTG < 6:105123/148‑1 CAACGGTTGCGATCGATTTCATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGT < 2:23241/147‑1 GATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTG > 6:347544/1‑138 GATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTG < 5:347544/138‑1 GATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGG > 2:176822/1‑130 GATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGG < 1:176822/130‑1 GGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTG > 1:177884/1‑91 GGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTG < 2:177884/91‑1 GTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCACCGACCCGGTGATCAAA > 3:737/1‑149 GTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA > 7:339209/1‑149 CGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGA < 8:339209/149‑1 GTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATC > 5:59546/1‑149 aCCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCG > 4:275431/2‑142 aCCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCG < 3:275431/141‑1 GCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGT > 8:116582/1‑149 GCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGgcggcgc < 7:116582/149‑8 CCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGG < 5:73665/63‑1 CCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGG > 6:73665/1‑63 CGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCG > 2:319785/1‑149 GCCGGCACGGTGATGACGGTTTTGCCGTCACTCAGCGTGAAGGTCAA‑TGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTC > 5:21734/1‑149 GCGTGAAGGTCAA‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGC < 6:59546/149‑1 cgtaGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACTACCGTCA > 4:8597/5‑149 TCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAA‑TGCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/203841‑203692‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACTACCGTCA > NC_002947/203763‑203906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |