New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 517608	53 (0.960)	3 (0.060)	3/246	NT	5.6%	coding (408/957 nt)	PP_0430	hypothetical protein
	?	NC_002947	= 517666	51 (0.960)					coding (350/957 nt)	PP_0430	hypothetical protein

GCCAGGATTTCGTGGCCGTGGTTAATGCAACCAGCCAGCAGCAGGGTCTTGTCGAAGAACTGGCGAATTTCTGCGGCCAGGGCGAACGGGCTCCAGGTGCCGGCATGGCCGCCCGCGCCTGCGGCGACGGCGATAAGGCCATCGACACCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/517456‑517608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctACGGCGGCCTGGTGCTCCACGATGTCACCACCCGCCGGCATGCCGAAAAGGCCGCCGAAGCCGGTGTCGATGGCCTTATCGCCGTCGCCGCAGGCGCGGGCGGCCATGCCGGCACCTGGAGCCCGTTCGCCCTGGCCGCAGAAATTCG  <  NC_002947/517666‑517519                                                                                                                                                                                                                                                                                                               GCCAGGATTTCGTGGCCGTGGTTAATGCAACCAGCCAGCAGCAGGGTCTTGTCGAAGAACTGGCGAATTTCTGCGGCCAGGGCGAACGGGCTCCAGGTGCCGGCATGGCCGCCCGCGCCTGCGGCGACGGCGATAAGGCCATCGACACC                                                                                                                                                          <  4:103372/149‑1  CCAGGATTTCGTGGCCGTGGTTAATGCAACCAGCCAGCAGCAGGGTCTTGTCGAAGAACTGGCGAATTTCTGCGGCCAGGGCGAACGGGCTCCAGGTGCCGGCATGGCCGCCCGCGCCTGCGGCGACGGCGATAAGGCCATCGACACCG                                                                                                                                                         >  7:140686/1‑149    AGGATTTCGTGGCCGTGGTTAATGCAACCAGCCAGCAGCAGGGTCTTGTCGAAGAACTGGCGAATTTCTGCGGCCAGGGCGAACGGGCTCCAGGTGCCGGCATGGCCGCCCGCGCCTGCGGCGACGGCGATAAGGCCATCGACACCGGC                                                                                                                                                       >  5:293100/1‑149                                                                  AATTTCTGCGGCCAGGGCGAACGGGCTCCAGGTGCCGGCATGGCCGCCCGCGCCTGCGGCGACGGCGATAAGGCCATCGACACCGGCTACGGCGGCCTGGTGCTCCACGATGTCACCACCCGCCGGCATGCCGAAAAGGCCGCCGAAGC                                                                                         <  5:232566/149‑1                                                                                                            GCCGCCCGCGCCTGCGGCGACGGCGATAAGGCCATCGACACCGGCTACGGCGGCCTGGTGCTCCACGATGTCACCACCCGCCGGCATGCCGAAAAGGCCGCCGAAGCCGGT                                                                                     <  7:235636/111‑1                                                                                                            GCCGCCCGCGCCTGCGGCGACGGCGATAAGGCCATCGACACCGGCTACGGCGGCCTGGTGCTCCACGATGTCACCACCCGCCGGCATGCCGAAAAGGCCGCCGAAGCCGGT                                                                                     >  8:235636/1‑111                                                                                                                                                        CTACGGCGGCCTGGTGCTCCACGATGTCACCACCCGCCGGCATGCCGAAAAGGCCGCCGAAGCCGGTGTCGATGGCCTTATCGCCGTCGCCGCAGGCGCGGGCGGCCATGCCGGCACCTGGAGCCCGTTCGCCCTGGCCGCAGAAATTC   <  6:208224/149‑1                                                                                                                                                         TACGGCGGCCTGGTGCTCCACGATGTCACCACCCGCCGGCATGCCGAAAAGGCCGCCGAAGCCGGTGTCGATGGCCTTATCGCCGTCGCCGCAGGCGCGGGCGGCCATGCCGGCACCTGGAGCCCGTTCGCCCTGGCCGCAGAAATTCG  >  8:241757/1‑149                                                                                                                                                                                                                                                                                                               GCCAGGATTTCGTGGCCGTGGTTAATGCAACCAGCCAGCAGCAGGGTCTTGTCGAAGAACTGGCGAATTTCTGCGGCCAGGGCGAACGGGCTCCAGGTGCCGGCATGGCCGCCCGCGCCTGCGGCGACGGCGATAAGGCCATCGACACCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/517456‑517608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctACGGCGGCCTGGTGCTCCACGATGTCACCACCCGCCGGCATGCCGAAAAGGCCGCCGAAGCCGGTGTCGATGGCCTTATCGCCGTCGCCGCAGGCGCGGGCGGCCATGCCGGCACCTGGAGCCCGTTCGCCCTGGCCGCAGAAATTCG  <  NC_002947/517666‑517519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.