| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 629919 | 49 (0.880) | 4 (0.080) | 4/240 | NT | 7.7% | coding (279/1395 nt) | eutB | ethanolamine ammonia‑lyase subunit alpha |
| ? | NC_002947 | = 629953 | 50 (0.960) | coding (245/1395 nt) | eutB | ethanolamine ammonia‑lyase subunit alpha | |||||
TTTTCTGCGCCACCAGCACCAGGTCCTGCACGCGCATGATCTTCGACACGGCAGCGGCCATTTCCGGGGTCAACCCGGGCGCCAGGGCGCGCAGGCTGTCTTCGTTGGCTTCCTCGCTCAGCAGCCAGTCACGCAGGCCACCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/629774‑629919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccacgATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTGGCCTGCGTGACTGGCTGCTGAGCGAGGAAGCCAACGAAGACAGCCTGCGCGCCCTGGCGCCCGGGTTGACCCCGGAAATGGCCGCTGCCGTGTCGAAGATCATGC < NC_002947/629953‑629807 TTTTCTGCGCCACCAGCACCAGGTCCTGCACGCGCATGATCTTCGACACGGCAGCGGCCATTTCCGGGGTCAACCCGGGCGCCAGGGCGCGCAGGCTGTCTTCGTTGGCTTCCTCGCTCAGCAGCCAGTCACGCAGGCCACCCA > 5:153935/1‑144TTTTCTGCGCCACCAGCACCAGGTCCTGCACGCGCATGATCTTCGACACGGCAGCGGCCATTTCCGGGGTCAACCCGGGCGCCAGGGCGCGCAGGCTGTCTTCGTTGGCTTCCTCGCTCAGCAGCCAGTCACGCAGGCCACCCA < 6:153935/144‑1 TTCGACACGGCAGCGGCCATTTCCGGGGTCAACCCGGGCGCCAGGGCGCGCAGGCTGTCTTCGTTGGCTTCCTCGCTCAGCAGCCAGTCACGCAGGCCACCCACGATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTG > 3:87953/1‑147 TTCGACACGGCAGCGGCCATTTCCGGGGTCAACCCGGGCGCCAGGGCGCGCAGGCTGTCTTCGTTGGCTTCCTCGCTCAGCAGCCAGTCACGCAGGCCACCCACGATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTG < 4:87953/147‑1 GGCAGCGGCCATTTCCGGGGTCAACCCGGGCGCCAGGGCGCGCAGGCTGTCTTCGTTGGCTTCCTCGCTCAGCAGCCAGTCACGCAGGCCACCCACGATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTGG > 5:239807/1‑140 GGCAGCGGCCATTTCCGGGGTCAACCCGGGCGCCAGGGCGCGCAGGCTGTCTTCGTTGGCTTCCTCGCTCAGCAGCCAGTCACGCAGGCCACCCACGATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTGG < 6:239807/140‑1 ACCCACGATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTGGCCTGCGTGACTGGCTGCTGAGCGAGGAAGCCAACGAAGACAGCCTGCGCGCCCTGGCGCCCGGGTTGACCCCGGAAATGGCCGCTGCCGTGTCG > 1:135059/1‑144 ACGATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTGGCCTGCGTGACTGGCTGCTGAGCGAGGAAGCCAACGAAGACAGCCTGCGCGCCCTGGCGCCCGGGTTGACCCCGGAAATGGCCGCTGCCGTGTCGAAGATCATG > 4:7914/1‑149 CGATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTGGCCTGCGTGACTGGCTGCTGAGCGAGGAAGCCAACGAAGACAGCCTGCGCGCCCTGGCGCCCGGGTTGACCCCGGAAATGGCCGCTGCCGTGTCGAAGATCATGC < 3:303473/149‑1 TTTTCTGCGCCACCAGCACCAGGTCCTGCACGCGCATGATCTTCGACACGGCAGCGGCCATTTCCGGGGTCAACCCGGGCGCCAGGGCGCGCAGGCTGTCTTCGTTGGCTTCCTCGCTCAGCAGCCAGTCACGCAGGCCACCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/629774‑629919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccacgATGCCCAGGCCTTCGCCCCGGTCAGCCACCTGACCGTGGGTGGCCTGCGTGACTGGCTGCTGAGCGAGGAAGCCAACGAAGACAGCCTGCGCGCCCTGGCGCCCGGGTTGACCCCGGAAATGGCCGCTGCCGTGTCGAAGATCATGC < NC_002947/629953‑629807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |