New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	711252 =	58 (1.050)	5 (0.090)	5/244	NT	8.5%	coding (1050/2832 nt)	ileS	isoleucine‑‑tRNA ligase
	?	NC_002947	711293 =	52 (0.990)					coding (1091/2832 nt)	ileS	isoleucine‑‑tRNA ligase

TAGCTGTGGCTGATGGTTTCGGTGTGCATCAGCGCACCGACTTCGCTCAGCTTCTCGACGATGGCCGGGTTGGCCTTCCAGATGAACTGGCCGCCGAAGAATGGCAGCGAGTCGACATACACGCCGTTGCTCTGCACCGGGGTAAGGATGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/711404‑711252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtcgACTCGCTG‑CCATTCTTCGGCGGCCAGTTCATCTGGAAGGCCAACCCGGCCATCGTCGAGAAGCTGAGCGAAGTCGGTGCGCTGATGCACACCGAAACCATCAGCCACAGCTACATGCACTGCTGGCGCCACAAGACCCCGCTGATCT  >  NC_002947/711293‑711439                                                                                                                                                                                                                                                                                                               TAGCTGTGGCTGATGGTTTCGGTGTGCATCAGCGCACCGACTTCGCTCAGCTTCTCGACGATGGCCGGGTTGGCCTTCCAGATGAACTGGCCGCCGAAGAATGGCAGCGAGTCGACATACACGCCGTTGCTCTGCACCGGGGTAAGGAT                                                                                                                                                          <  8:61870/149‑1       TGGCTGATGGTTTCGGTGTGCATCAGCGCACCGACTTCGCTCAGCTTCTCGACGATGGCCGGGTTGGCCTTCCAGATGAACTGGCCGCCGAAGAATGGCAGCGAGTCGACATACACGCCGTTGCTCTGCACCGGGGTAAGGATGTCG                                                                                                                                                      <  2:214324/147‑1                                                                                               CGAAGAATGGCAGCGAGTCGACATACACGCCGTTGCTCTGCACCGGGGTAAGGATGTCG‑‑TCGTTGACCATTCTTCGGCGGCCAGTTCATCTGGAAGGCCAACCCGGCCATCGTCGAGAAGCTGAGCGAAGTCGGTGCGCTGATGCACAC                                                          >  6:107718/1‑149                                                                                                              AGTCGACATACACGCCGTTGCTCTGCACCGGGGTAAGGATGTCGACTCGCTG‑CCATTCTTCGGCGGCCAGTTCATCTGGAAGGCCAACCCGGCCATCGTCGAGAAGCTGAGCGAAGTCGGTGCGCTGATGCAC                                                            >  3:313703/1‑133                                                                                                              AGTCGACATACACGCCGTTGCTCTGCACCGGGGTAAGGATGTCGACTCGCTG‑CCATTCTTCGGCGGCCAGTTCATCTGGAAGGCCAACCCGGCCATCGTCGAGAAGCTGAGCGAAGTCGGTGCGCTGATGCAC                                                            <  4:313703/133‑1                                                                                                                TCGACATACACGCCGTTGCTCTGCACCGGGGTAAGGATGTCGACTAGCTG‑CCATTCTTCGGCGGCCAGTTCATCTGGAAGGCCAACCCGGCCATCGTCGAGAAGCTGAGCGAAGTCGGTGCACTGATGCACACCGAAACCATCAGCCA                                           >  4:99199/1‑148                                                                                                                                         CCGGGGTAAGGATGTCG‑‑TCGTTGACCATTCTTCGGCGGCCAGTTCATCTGGAAGGCCAACCCGGCCATCGTCGAGAAGCTGAGCGAAGTCGGTGCGCTGATGCACACCGAAACCATCAGCCACAGCTACATGCACTGCTGGCGCCACAA                <  5:107718/149‑1                                                                                                                                                         GACTCGCTG‑CCATTCTTCGGCGGCCAGTTCATCTGGAAGGCCAACCCGGCCATCGTCGAGAAGCTGAGCGAAGTCGGTGCGCTGATGCACACCGAAACCATCAGCCACAGCTACATGCACTGCTGGCGCCACAAGACCCCGCTGATCT  <  7:328951/148‑1                                                                                                                                                                                                                                                                                                               TAGCTGTGGCTGATGGTTTCGGTGTGCATCAGCGCACCGACTTCGCTCAGCTTCTCGACGATGGCCGGGTTGGCCTTCCAGATGAACTGGCCGCCGAAGAATGGCAGCGAGTCGACATACACGCCGTTGCTCTGCACCGGGGTAAGGATGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/711404‑711252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtcgACTCGCTG‑CCATTCTTCGGCGGCCAGTTCATCTGGAAGGCCAACCCGGCCATCGTCGAGAAGCTGAGCGAAGTCGGTGCGCTGATGCACACCGAAACCATCAGCCACAGCTACATGCACTGCTGGCGCCACAAGACCCCGCTGATCT  >  NC_002947/711293‑711439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.